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Metagenomics Workshop Manual

Developed by Dr. Regina Lamendella at Juniata College, this manual provides an overview of metagenomics sequencing and analysis. Module 1 describes the protocols for preparing microbial samples for Illumina sequencing, which includes preparation of the Illumina library, quantification of the pooled library with the Qubit fluorometer, and verification of the library quality with the Bioanalyzer. Module 2 illustrates how the QIIME 16S and Fungal ITS workflows can be used to analyze metagenomics datasets.

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GCAT-SEEK Workshop Training Materials

This collection contains the workshop manuals from previous GCAT-SEEK workshops. The topics covered in these manuals include genome assembly, eukaryotic genome annotations, metagenomics, and RNA-Seq.

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Wilson Leung