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Notebooks in CyVerse

YouTube playlist of videos on using computational notebooks in CyVerse

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Tyson Lee Swetnam onto Webinars

Workflow Management

YouTube playlist of Workflow Management

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Tyson Lee Swetnam onto Webinars

Managing your Data in CyVerse

YouTube playlist on Managing your data in CyVerse

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Tyson Lee Swetnam onto Webinars

Image Analysis and Phenotyping

YouTube playlist on image analysis and phenotyping

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Tyson Lee Swetnam onto Webinars

Genomics & Genomic file manipulation

YouTube playlist on Genomics

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Tyson Lee Swetnam onto Webinars

Metagenomics

YouTube playlist on Metagenomics

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Tyson Lee Swetnam onto Webinars

Transcriptomics

YouTube playlist on Transcriptomics

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Tyson Lee Swetnam onto Webinars

Assembly and Variant Detection

YouTube playlist on Assembly and Variant Detection

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Tyson Lee Swetnam onto Webinars

Genome Annotation

YouTube videos on Genome Annotation in CyVerse

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Tyson Lee Swetnam onto Webinars

Machine Learning

YouTube videos on ML in CyVerse

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Tyson Lee Swetnam onto Webinars

Re-envisioning Diversity in Higher Education: From Raising Awareness to Building Critical Consciousness Among Faculty - by Dana M. Stachowiak

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Maggie Diamond-Stanic onto S-JEDI learning community

Getting Started with CyVerse

Playlist of Videos

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Tyson Lee Swetnam onto Webinars

Understanding Structural Racism - TEDx talk by Luiza Lodder

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Maggie Diamond-Stanic onto S-JEDI learning community

Leading Courageous Conversations on Race Equity - The Community Nonprofit New York Knowledge Center

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Profile picture of Maggie Diamond-Stanic

Maggie Diamond-Stanic onto S-JEDI learning community

Anti-Racism Defined - Alberta Civil Liberties Research Centre

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Profile picture of Maggie Diamond-Stanic

Maggie Diamond-Stanic onto S-JEDI learning community

Fantastic Birds and Where to Find Them

5E lesson plan for middle/high school aligned to NGSS standards.

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Carla Case-Sweeney onto HS BIO

Introduction to nucleotide sequence analysis and protein modeling in MEGA and PyMol using coronavirus SARS-CoV-2

Introduction into computational approaches in phylogeny and protein modeling based on coronavirus SARS-CoV-2 (caused COVID-19 pandemic). Two self-guided tutorials for standard lab classes of 2.5 hours. Level: undergraduate students majoring in biology.

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Steven M Caruso onto Online Genetics Lab

Fear of the CURE: A Beginner’s Guide to Overcoming Barriers in Creating a Course-Based Undergraduate Research Experience†

"Here, we will review the perceived challenges of developing a CURE and provide practical strategies to overcome these challenges."

Govindan, B., Pickett, S., and Riggs, B. 2020 JMBE Vol21(2) DOI: https://doi.org/10.1128/jmbe.v21i2.2109

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White Academia: Do Better - Jasmine Roberts

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Maggie Diamond-Stanic onto S-JEDI learning community

Dastaset resources

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Designing a case

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Facilitaing cases tips

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Adapting cases

thoughts on adapting existing cases

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Hardy-Weinberg Equilibrium: a swirl resource

Students will use swirl to understand Hardy-Weinberg equilibrium. The lesson starts with observed numbers of individuals for each genotype, and students will work through a number of steps to assess whether or not the population is in equilibrium.

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Erika Crispo onto evolution

Ecology Resources

A collection of ecology modules that are ready or adaptable for online learning.

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Maria-Veronica Ciocanel onto Math bio resources