Skip to Main Content
Powered by QUBES

ESTEEM

Resources

Want to find additional resources? Browse resources on QUBES!
QUBES hosts not only the resources shown here, but many more created by the broader QUBES community.
Text Search:
Applied Filters
    Database Construction and Sampling
    Creating your own database is an excellent way for students to learn the trials and tribulations of data collection and management. Construction of three simple databases using a spreadsheet is...

    Keywords: databasesdata managementdata collectiondata ethicsdata integrity

    127

    views

    83

    downloads

    0

    comments

    0

    adaptations

    Biostatistical Tools
    This Excel collection of workbooks has tools for: 1. Linear regression through the origin 2. Linear regression not through the origin 3. Polynomial fit 4. A simple chi-square analysis to test...

    Keywords: linear regressionchi-square analysisHardy-Weinberg equilibriumpolynomial regression

    111

    views

    58

    downloads

    0

    comments

    0

    adaptations

    GeoPhyl
    This Excel workbook allows students to explore evolution over space and time using published data on the invasive plant Tamarix (salt cedar).

    Keywords: Invasive SpeciesTamarixsalt cedarpermutation testrandom geographic distribution

    104

    views

    44

    downloads

    0

    comments

    0

    adaptations

    Dynamic Programming
    In bioinformatics, dynamic programming is mainly used to align nucleotide and amino acid sequences, and to predict RNA and protein folding from primary sequence data.

    Keywords: RNAamino acid sequenceSequence alignmentdynamic programmingprotein folding

    87

    views

    48

    downloads

    0

    comments

    0

    adaptations

    Continuous Growth Models
    This Excel worksheet compares user-input growth data with predictions under linear, exponential, and logistic models of growth. Introduces concepts of statistical analysis that can be additionally...

    Keywords: exponential growthlogistic growthcurve fittinglinear growthgrowth models

    83

    views

    30

    downloads

    0

    comments

    0

    adaptations

    Developmental Allometry: Scaling in Growth
    This Excel workbook illustrates a number of allometric equations in animal growth. The workbook also calculates an allometric equation with graphical output for data entered by the user.

    Keywords: allometrybrain developmentSkeletal Systemmetabolic rate

    82

    views

    45

    downloads

    0

    comments

    0

    adaptations

    Island Biogeography
    This Excel workbook demonstrates the principles of the MacArthur-Wilson theory of Island Biogeography. It allows the user to define the mainland species pool, area of the island, and distance of...

    Keywords: Logarithmsspecies richnessIsland biogeographyExponential FunctionsMacArthur-Wilson Theorypower functions

    104

    views

    14

    downloads

    0

    comments

    0

    adaptations

    Luria-Delbruck
    These two workbooks model the evolution of phage resistance in a bacterial population under two alternative hypotheses.

    Keywords: phageLuria-Delbruckresistance

    1572

    views

    292

    downloads

    2

    comments

    0

    adaptations

    BioGrapher
    BioGrapher is an Excel front-end for the AT&T GraphViz graphical visualization and layout package (http://www.graphviz.org/).

    Keywords: network theorygraph theoryphylogenetic trees

    616

    views

    41

    downloads

    0

    comments

    0

    adaptations

    3D FractaL-Tree
    3D FractaL-Tree allows scientists to collect data from actual specimens in the field or laboratory, insert these measurements into a spatially explicit L-system package, and then visually compare...

    Keywords: fractalsL-systems

    1262

    views

    281

    downloads

    0

    comments

    0

    adaptations

    Split Decomp
    This Excel worksheet performs split decomposition on a set of four DNA sequences and their associated amino acid sequences. The user can type in the sequences or paste them in from a text file.

    Keywords: phylogenyDNA sequenceamino acid sequencesplit decomposition

    116

    views

    59

    downloads

    0

    comments

    0

    adaptations

    Linkage Analysis
    This Excel workbook simulates a linkage analysis problem with up to four alleles. Based on the offspring produced by a multihybrid testcross, the user builds a model of the gene order,...

    Keywords: recombinationlinkage analysis

    93

    views

    31

    downloads

    0

    comments

    0

    adaptations