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    1999-T_Chen-HL_He-GM_Church-S_Shafer-Modeling Gene Expression with Differential Equations
    The paper proposes and give great detail for a differential equation model for gene expression with two methods for constructing the model from a set of temporal data.
    gene expression gene kinetic gene translation gene transcription
    Potential Scenario
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    1992-John_Mathews-Bounded population growth-a curve fitting lesson
    The purpose of this article is to present two methods for fitting the logistic curve to data supplied by the U. S. census bureau.
    data logistic linearization fitting
    Potential Scenario
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    1999-F_Brauer-What Goes Up Must Come Down
    This paper is a wonderfully general analysis of the following, “It is natural to ask whether a particle propelled upwards takes longer to fall to earth from its maximum height than it takes to rise to this maximum height for frictional forces.
    projectile friction falling time rising time maximum height
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    1986-Cook-Witten-One-dimensional linear and logistic harvesting models
    Some of the results in the literature on simple one-dimensional, density dependent, discrete and continuous models-with and without harvesting-are reviewed.
    logistic continuous population linear discrete harvestinbg
    Potential Scenario
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    1975-DH_Griffel-Teaching the formation and solution of differential equations
    This paper raises many interesting questions about teaching the formation (and solution) of differential equations, i.e. modeling with differential equations.
    parasites Topography population epidemic traffic flow social interactions fish weight arms race
    Potential Scenario
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    1988-Michael Intriligator-Dagobert Brito-A Predator-Prey Model of Guerrilla Warfare
    The authors present a three variable: numbers of guerrillas, numbers of regular (government) soldiers, and size of population controlled by the guerrillas, at time t), nonlinear system of three differential equations.
    combat model guerrilla warfare government
    Potential Scenario
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    2018-Nyanginja-Angwenyi-Musyoka-Orwa - Mathematical modeling of the effects of public health education on tungiasis
    In this paper, we formulate and study a mathematical model for the dynamics of jigger infestation incorporating public health education using systems of ordinary differential equations and computational simulations.
    disease endemic reproduction number tungiasis jigger infestation
    Potential Scenario
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    2018-Robert_Phair-Differential_equation_methods_for_simulation_of_GFP_kinetics_in_non–steady_state_experiments
    Here, we derive new tracer kinetic analytical methods for non–steady state biological systems by constructing mechanistic nonlinear differential equation models of the underlying cell biological processes.
    protein quality control kinetics Cells steady state chemical kinetics fluouresence photoactivation inytracellular
    Potential Scenario
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    2008-Claire_Vailance-Reaction_Kinetics-Course_Notes
    This is but one of several set of notes which may interest the reader on chemical kinetics.
    kinetics parameters rate constant chemical kinetics reactions
    Article or Presentation
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    2021-Brian_Winkel-Modelling_sublimation_of_carbon_dioxide
    We report results in our efforts to model sublimation of carbon dioxide and the associated kinetics order and parameter estimation issues in our model.
    data parameter estimation carbon dioxide sublimation dry ice
    Article or Presentation
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    2013-Brian_Winkel-An_Optimal_Control_Model_in_Insect_Colonies
    we find and develop background material on an application of optimal control theory to model the evolutionary strategy of an insect colony to produce the maximum number of queen or reproducer insects in the colony at the end of a season.
    insect colony optimal control parameter
    Article or Presentation
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    1999-F_Brauer-What_Goes_Up_Must_Come_Down
    It is natural to ask whether a particle propelled upwards takes longer to fall to earth from its maximum height than it takes to rise to this maximum height for frictional forces that are nonlinear functions of velocity.
    resistance falling projectile vertical projectile
    Article or Presentation
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    2

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    1988-Michael_Intriligator-Dagobert_Brito-A_Predator-Prey_Model_of_Guerrilla_Warfare
    The purpose of this paper is to analyze guerrilla warfare by means of a dynamic model. The model suggests specific paths for the evolution of such ward and how such wars might be fought or combatted.
    simulation guerilla warfare warfare combat
    Article or Presentation
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    2001-A_Tsoularis-Analysis_of_logistic_growth_models
    The paper presents an historical development of the logistic equation in its various forms, including Verhulst, Pearl and Reed, Gompertz, Bertalanffy, Richards, and others.
    logistic population growth curve limited growth Gompertz history logistic equation Verhulst Pearl and Reed Bertalanffy Richards
    Free Online Textbook
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    2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
    I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can always access the current version.
    biology textbook systems dyanmical system