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  • Created 03 Sep 2019

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    Shuchismita Dutta created All group members project
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    Dax Ovid created All group members project

    Hello everyone, I'm looking for the Zoom link--I tried to two Zoom links from the previous weeks and they did not work. Where is the link posted?

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      Mary Mulcahy created All group members project

      I have created a new zoom link if anyone wants to join me today (now) for about 20 minutes:

      Join Zoom Meeting
      https://pitt.zoom.us/j/91877955907

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      I have created a new zoom link if anyone wants to join me today (now) for about 20 minutes:

      Join Zoom Meeting
      https://pitt.zoom.us/j/91877955907

      Meeting ID: 918 7795 5907
      Passcode: 830904

    • PLG_GROUPS_ACTIVITY_PROFILE_PICTURE
      Dax Ovid created All group members project

      The link from the previous Friday meeting was shared with me over email--sounds like we will be using the same link week after week! I met with…

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      The link from the previous Friday meeting was shared with me over email--sounds like we will be using the same link week after week! I met with Denise and Mary to discuss possible assessment for data science education and scientist spotlights. Looking forward to touching base with you all again soon!

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    Sam S Donovan created All group members project

    Here is the link to the pdf that Joanna shared for easy access. 

    Thanks again to Kyla for sharing her exciting (and challenging) project in…

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    Here is the link to the pdf that Joanna shared for easy access. 

    Thanks again to Kyla for sharing her exciting (and challenging) project in our meeting yesterday. The Notes are here but I haven't had a chance to clean them up at all. If you think of more suggestions / resources for Kyla you can drop them in project updates or into the notes doc. 

    -sam

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    Kristin Jenkins created All group members project

    Joanna shared the recent SPUR (Scholarship and Practice of Undergraduate Research) journal in which there is an article about her project…

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    Joanna shared the recent SPUR (Scholarship and Practice of Undergraduate Research) journal in which there is an article about her project "Flying with Swallows" (p15).  The issue is in the Files master repository if you would like to check it out.

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    Kristin Jenkins uploaded All group members project
    uploaded Sum20SPUR-fullissue.pdf in project files
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    Deborah Rook created All group members project

    Facilitators

    As with the first week, please post an update about your group into the forum here. Thanks!

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    Shuchismita Dutta created All group members project

    Dear All,

    Looking forward to continuing our discussions today at 11.30am

    Zoom Room

    Link- https://us02web.zoom.us/j/88044016027?pwd=Mkp4NTZ5Q…

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    Dear All,

    Looking forward to continuing our discussions today at 11.30am

    Zoom Room

    Link- https://us02web.zoom.us/j/88044016027?pwd=Mkp4NTZ5Q1ZkTlB4bWlSTVg4RmhuQT09

    Call In- (646) 876-9923 or (669) 900-6833 and Meeting ID: 880 4401 6027, Passcode: 529739

     

    regards,

    Shuchi.

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    Deborah Rook created All group members forum
    Forum category "Week 3 Group Meetings Report Out" created
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    Wilson Leung created All group members project

    Dear colleagues,

    In preparation for our discussions tomorrow afternoon, I have created an initial draft tutorial on how to analyze your own…

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    Dear colleagues,

    In preparation for our discussions tomorrow afternoon, I have created an initial draft tutorial on how to analyze your own RNA-Seq data with the GEA Jupyter Notebooks. The tutorial, sample RNA-Seq data, and associated assets are available in the "GEA_Upload_RNA-Seq_Data_CyVerse" folder on Google Drive.

    The tutorial describes how to install and configure Cyberduck to transfer data from the local computer to the CyVerse Data Store, configure the launch settings to enable access of the uploaded RNA-Seq data within JupyterLab, and analyze the uploaded RNA-Seq data using fastqc and kallisto.

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    Sam S Donovan created All group members project

    Dear CC-CURE Working Group, 

    This is a reminder that we will be meeting tomorrow, Thursday September 24th at 5PM Eastern. 

    Join…

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    Dear CC-CURE Working Group, 

    This is a reminder that we will be meeting tomorrow, Thursday September 24th at 5PM Eastern. 

    Join Zoom Meeting
    https://pitt.zoom.us/j/97484679675

    Our agenda features informal introductions to CURE project ideas from Kyla Flanagan and Erica Harris. 

    - Kyla and Erica, if you have materials that would be useful for folks to review in advance of the meeting pease feel free to share them. 

    You can find the full agenda (and the opportunity to suggest other items) on our group notes page

    I'm looking forward to the conversations. 

    -sam
     
    ____
    Donovan, Samuel S is inviting you to a scheduled Zoom meeting.

    Topic: CGC
    Time: Sep 23, 2020 04:30 PM Eastern Time (US and Canada)

    Join Zoom Meeting
    https://pitt.zoom.us/j/97484679675

    Meeting ID: 974 8467 9675
    Passcode: 816448
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    Meeting ID: 974 8467 9675
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    Meeting ID: 974 8467 9675
    Passcode: 816448

  • PLG_GROUPS_ACTIVITY_PROFILE_PICTURE
    Wilson Leung created All group members project

    Dear colleagues,

    In preparation for our next meeting on Thursday, I have added a "GEP_RNA-Seq_Resources" Google Doc to the…

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    Dear colleagues,

    In preparation for our next meeting on Thursday, I have added a "GEP_RNA-Seq_Resources" Google Doc to the "Genomics Lessons with GEA" Google Drive. This document contains the list of RNA-Seq curriculum materials developed by the Genomics Education Partnership (GEP) which could provide some potential ideas for developing the new Jupyter RNA-Seq notebooks.


    In particular, the "Using FlyBase RNA-Seq Tools to Investigate Gene Expression Profiles" walkthrough illustrates how students can use RNA-Seq expression profiles to investigate the potential function of a gene. The "Motif Discovery in Drosophila" walkthrough illustrates how students can analyze a collection of genes with similar expression patterns using the MEME Suite to identify conserved regulatory motifs.

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    Louise Mead created All group members forum
    Forum thread "Avida-ED" created
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    Louise Mead joined All group members project
    joined the project
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    Sheela Vemu uploaded All group members project
    uploaded Jindal Vemu Document.docx in project files
  • PLG_GROUPS_ACTIVITY_PROFILE_PICTURE
    Tamara Basham created All group members project

    Hello,

    where is the meeting information posted? Thanks.

  • PLG_GROUPS_ACTIVITY_PROFILE_PICTURE
    Deborah Rook created All group members project

    Facilitators- Facilitators Tuesday meeting starts in 10, sorry for the late notice!- 

    Zoom: https://us02web.zoom.us/j/896065…

    more

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    Pat Marsteller created All group members project

    Potential quests for scientist interviews

    Where did you grow up and what was it like there? Tell me about your family.

    Why did you decide to…

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    Potential quests for scientist interviews

    Where did you grow up and what was it like there? Tell me about your family.

    Why did you decide to become a researcher? How did you choose your current research area?

    What was your pathway?  Did you do a postdoc?

    What challenges or obstacles did you have to overcome in order to be successful in your field?

    What keeps you motivated to do research?

    Where did you do your training and why did you decide to attend those institutions? (undergraduate degree, graduate degree, etc.)

    Why did you decide on your disciplinary/research area? Have you done research in any other areas? If so, which?

    What classes do you currently teach, or have you taught? Which was your favorite and why?

    Outside of your research responsibilities, what else do you do as part of your job?

    What do you do when you are not at work?

    What are your hobbies and interests?

    How do you spend your day?

    How do you balance work with other interests?

    What is the most important advice you would give me?

     

     

    Modified from entering research by Emory Grads and undergrads

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    Justin Michael Bradshaw joined All group members project
    joined the project
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    Merrie Renee Richardson joined All group members project
    joined the project
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    Kristen Butela joined All group members project
    joined the project