Genome Solver - A bioinformatics pipeline for community science
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20 Feb 2024 | Contributor(s): Vinayak Mathur, Gaurav Arora, Anne Rosenwald | doi:10.25334/SEDX-YS29
The Genome Solver was an NSF-funded project developed as a way to train undergraduate life science faculty in basic web-based tools for bioinformatics. As part of the project we developed a one-day workshop consisting of bioinformatics modules on the theme of bacterial genomics, which we...
Reflective Writing Tools: Building Skills and Habits of Thinking in Becoming a Scientist
25 Dec 2020 | Contributor(s): Sally Molloy, William Davis, Elizabeth Moy, GC Jernstedt, Melinda Harrison, Vinayak Mathur, Matthew David Mastropaolo | doi:10.25334/2PD1-NT03
Reflective writing tools are intended to help students better connect current learning experiences to prior learning, engage the role of emotion in current and future learning, and assess learning experiences to improve future learning.
Genome Solver: Building faculty skills in bioinformatics
23 Jul 2020 | Contributor(s): Vinayak Mathur, Gaurav Arora, Vinodh Ganesan, Hita Gupta, Mariana Kazarian, Anne Rosenwald | doi:10.25334/G1B6-JJ53
Genome Solver (GS) began in 2011 as an NSF-funded project for faculty training in basic web-based bioinformatics skills.
Introduction to Genome Annotation
09 Jan 2020 | Contributor(s): Selene Nikaido | doi:10.25334/2ANZ-SV60
This exercise is an adaptation of the Annotation Lesson by Rosenwald et al. It introduces the use of bioinformatics tools to extract information from genome databases. It is a basic lesson on genome annotation databases.
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