Support

Support Options

  • Knowledge Base

    Find information on common questions and issues.

  • Support Messages

    Check on the status of your correspondences with members of the QUBES team.

Contact Us

About you
About the problem

Biobyte 3 - Lab reports as reproducible research

By Sam S Donovan1, Drew LaMar2

1. University of Pittsburgh 2. College of William and Mary

This short activity introduces a discussion of reproducibility in scientific research and ways that we might address these ideas with undergraduates. There is an opportunity to use a prototype version of Serenity to explore BIRDD data.

Listed in Teaching Materials | resource by group Data Science in Undergraduate Biology Education (DS-UBE)

Version 1.0 - published on 14 Aug 2019 doi:10.25334/9MMK-JH89 - cite this

Licensed under CC Attribution-ShareAlike 4.0 International according to these terms

Activity.png BIRDD_activity.png Reproducable_research.png Serenity_plot.png

Description

This 30 minute large group activity is designed to introduce reproducibility as an important and emerging practice in science. The group work takes advantage of a Shiny app called Serenity that runs in a browser, allows students to work with R based analysis and visualization tools, and submit their work as a reproducible package. This prototype activity is built around a Galapagos Finch morphological dataset with over 7,000 individuals that was published as part of the BIRDD Project

There is a discussion forum where you are encouraged to ask questions, share ideas for how to use these materials and make them better.

 

Contents

Cite this work

Researchers should cite this work as follows:

Tags

Notes

This is version 1 as presented at the 2019 BioQUEST / QUBES Summer Workshop titled, “Evolution of Data in the Classroom: From Data to Data Science”.

Data Science in Undergraduate Biology Education (DS-UBE)

Data Science in Undergraduate Biology Education (DS-UBE) group image

When watching a resource, you will be notified when a new version is released.