Lesson VII - Synteny
Author(s): Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
1071 total view(s), 950 download(s)
Summary:
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
Contents:
AR39_PRIPRegion.faa(FAA | 2 KB)- CWL029_PRIPRegion.faa(FAA | 1 KB)
- J138_PRIPRegion.faa(FAA | 1 KB)
- LPCoLN_PRIPRegion.faa(FAA | 2 KB)
Synteny Exercise -July2020.docx(DOCX | 8 MB)- Synteny Exercise Key-July2020.docx(DOCX | 8 MB)
Synteny_ Aug 142020 WS. pptx.pptx(PPTX | 14 MB)- TW183_PRIPRegion.faa(FAA | 1 KB)
- License terms
Description
The lesson contains a powerpoint slide deck, an exercise (which requires the download of a piece of free software called Mauve - directions are included), and the key to the exercise.
Notes
Materials were updated summer 2020 to reflect changes to the external tools cited in the lesson.
Cite this work
Researchers should cite this work as follows:
- Gaurav Arora, Anne Rosenwald, Vinayak Mathur (2020). Lesson VII - Synteny. Genome Solver, (Version 3.0). QUBES Educational Resources. doi:10.25334/SGQF-1W47