Active LENS MSU 2019 Avida-ED Exercise 1 Data Analysis

	A	B	C	D	E	F	G	H	I	J	K	L	M	N	O	P	Q	R	S	T	U	V	W	X	Y	Z	AA	AB	AC	AD	AE	AF	AG	AH	AI	AJ	AK	AL	AM	AN	AO	AP	AQ	AR	AS	AT	AU	AV	AW	AX	AY	AZ	BA	BB	BC	BD	BE	BF	BG	BH	BI	BJ	BK	BL	BM	BN	BO	BP	BQ	BR	BS	BT	BU	BV	BW	BX	BY	BZ	CA	CB	CC	CD	CE	CF	CG	CH	CI	CJ	CK	CL	CM	CN	CO	CP	CQ	CR	CS	CT	CU	CV
1		Name
2	Genome Position	Jim1	Jim2	Jim3	Catherine1	Catherine2	Catherine3	Jayme1	Jayme2	Jayme3	Katcher1	Katcher2	Katcher3	Nan1	Nan2	Nan3	Brad1	Brad2	Brad3	Wayne1	Wayne2	Wayne3	Torrey1	Torrey2	Torrey3	Michael1	Michael2	Michael3	Emily1	Emily2	Emily3	John1	John2	John3	Eric1	Eric2	Eric3	Shannon1	Shannon2	Shannon3	Pedro1	Pedro2	Pedro3	Rattray1	Rattray2	Rattray3	ST 46	ST 47	ST 48	ST 49	ST 50	ST 51	ST 52	ST 53	ST 54	ST 55	ST 56	ST 57	ST 58	ST 59	ST 60	ST 61	ST 62	ST 63	ST 64	ST 65	ST 66	ST 67	ST 68	ST 69	ST 70	ST 71	ST 72	ST 73	ST 74	ST 75	ST 76	ST 77	ST 78	ST 79	ST 80	ST 81	ST 82	ST 83	ST 84	ST 85	ST 86	ST 87	ST 88	ST 89	ST 90	ST 91	ST 92	ST 93	ST 94	ST 95	ST 96	ST 97	ST 98	ST 99
3	1		d													q																						x
4	2																												m								d
5	3													x												x											h									k
6	4	x										x					l					h						c	l												g
7	5																																								g
8	6															v				a
9	7												x	f	f										k	f									e
10	8			h																d																								y
11	9						u																	u							t		t				q			g
12	10												c															t																h
13	11		s																								j																k
14	12															v																					n					v				x
15	13			p													z		n																										p
16	14	v										v											d										k												x
17	15																				f
18	16																																												t
19	17		k										c										o												p
20	18																					g								s					g
21	19	a	g							o				m												m		z						m		x	u
22	20													i				r				p				i															e
23	21					n																																			u
24	22	f											y								t									t
25	23			r												g					i															b		g						w
26	24			f
27	25	b		v												o
28	26								f					x		m										x									y										r
29	27				y			h			h				l																h							s
30	28													l												l															s
31	29	a						z			z			w												w
32	30														q															g													i		t
33	31																										m					s												x
34	32													o											m	o												f	d
35	33															w	d															p
36	34																				i		k	s									t
37	35			s		h														c	o						r																		m
38	36													b			a			z
39	37					i				w																b						d
40	38	z							w					r																												k
41	39								q																	r																		k
42	40								m																																			d
43	41																			d			a																	h			o
44	42																				b							x		u					t		z
45	43		v			m				v
46	44				r													m
47	45				q												p	t
48	46				g												q	k																	u				g				y
49	47					p																																								x
50	48				a																						c													h
51	49					b				v										k					e			p		f					r
52	50																		a			i															r
53
54	# Mutations	7	5	6	5	6	1	2	4	4	2	2	4	10	3	7	6	4	2	6	6	4	4	2	3	10	4	5	2	5	2	3	3	1	7	2	7	4	2	3	5	2	4	6	6	3
55
56	Identity
57	a	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
58	b	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0
59	c	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0
60	d	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0
61	e	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
62	f	1	0	1	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0
63	g	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	1	1
64	h	0	0	1	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	2
65	i	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
66	j	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
67	k	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
68	l	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0
69	m	0	0	0	0	1	0	0	1	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	1	1	1	0	1	0	0	0	0	1	0	0	0	0	0	0
70	n	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
71	o	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
72	p	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0
73	q	0	0	0	1	0	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
74	r	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	1	0	0	0
75	s	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0
76	t	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	1	1	0	2	0	1	0	0	0	0	0
77	u	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0
78	v	1	1	1	0	0	0	0	0	2	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
79	w	0	0	0	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
80	x	1	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	1	0	1	0	0
81	y	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
82	z	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100