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    Mark-Recapture
    A common method used to estimate the population size of a species is the Mark-Recapture method.

    Keywords: mark-recapture analysispopulation estimation

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    Leslie/Lefkovitch Matrix Models for Age or Stage-structured Populations
    This Excel workbook uses the Leslie matrix model for population projection of age-class structured populations, and also allows Lefkovitch matrix models for stage-class structured populations.

    Keywords: survivalpopulation ecologyfecundityLeslie matrixeigenvalueseigenvectorsLefkovitch matrixage-class structured populationsstage-class structured populationsreproductive value

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    Connecting Viral Pandemics to Ecological Population Growth Models
    In this activity students use the HHMI Population Growth Models interactive to explore R0 for diseases and discuss the importance of connecting population ecology to current events like the...
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    Exploring Population Change without Selection: Avida-Ed Lab Book Exercise 4
    An introductory activity exploring how a population changes without natural selection using the Avida-ED simulation.

    Keywords: population geneticsEvolutionavida-edsoftware simulationsSelection

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    Population Ecology in Swirl: Estimating Population Sizes
    The students will learn to estimate population sizes and consider assumptions of mathematical models and their applicability to the ecology of an organism/population

    Keywords: RSwirl

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    Hardy-Weinberg Equilibrium
    This module introduces the Hardy-Weinberg model in the context of understanding the population's genotype and allele frequencies. It is intended for an introductory biology audience.

    Keywords: genotypeallelesGenetics and EvolutionFrequenciesHardy-Weinberg model

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    Predator-Prey Dynamics: the Lotka-Volterra Model
    This module introduces the Lotka-Volterra model in the context of understanding how predator and prey interact. It is intended for an introductory biology audience.

    Keywords: differential equationsecologypredatory-prey modelLotka-Volterrapredator-prey interactions

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    Using computational molecular modeling software to demonstrate how DNA mutations cause phenotypes
    Students require a deep understanding of the central dogma before they can understand complex topics such as evolution and biochemical disorders. However, getting undergraduate biology students to...

    Keywords: Protein Structurecomputational modelingcentral dogmaplant leaf structurePhenotype/Genotype

    2016

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    Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems
    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...

    Keywords: modelingEvolutionecologyagent-based modelingGenetic Driftenvironmental scienceNatural Selectioncompetitive coevolutionsimulation modelingevolutionary reasoning

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    2006-Thomas_Lingefjard-Faces of mathematical modeling
    In this paper I will discuss and exemplify my perspectives on how to teach mathematical modeling, as well as discuss quite different faces of mathematical modeling.

    Keywords: teaching modeling

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    A Framework for Modeling to Encourage Interdisciplinary Conversations
    Presentation given as part of a minisymposium at SIAM 2016 on interdisciplinary approaches to modeling.

    Keywords: modelinginterdisciplinaryminisymposium

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    Human Population Growth and Greenhouse Gas Emissions
    Humans alter the climate by emitting greenhouse gases, by changing planetary albedo, and by altering atmospheric chemistry. Between 1900 and 2000, humans' emissions of carbon into the atmosphere...

    Keywords: demographyhuman populationgreenhouse gas emissions

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    Teaching Population Dynamics with Data and HHMI BioInteractive
    Presented at NABT 2019, we demonstrate how the Population Dynamics Click & Learn resource can be customized for any organism - using the Lionfish invasion as an example

    Keywords: population growthHHMI BioInteractive

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    How Many Salamanders are in the forest? Testing capture-recapture
    Collecting data on how populations respond to environmental change requires accurate estimates of population sizes. This activity explores one method for estimating population sizes across three...

    Keywords: salamanderCapture mark-recaptureAudience level - Introductory UG - majorsAudience level - Introductory UG - non-majors

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    To Vaccinate or Not to Vaccinate
    To vaccinate or not to vaccinate, that is the question. Much of the recent trend in society against vaccination is that the general population does not understand 1) how vaccines work and 2) how...

    Keywords: pathogenELISAimmunityantibodyAntigen

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    Populus: Simulations of Population Biology
    Link to Populus Software

    Keywords: simulationpopulation growthpopulus

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    Exploring the population dynamics of wintering bald eagles through a population model
    This is an FMN participant modification of the TIEE module "Exploring the population dynamics of wintering bald eagles through long-term data" authored by Julie Beckstead, Alexandra N....

    Keywords: ecologyLabEcological Society of AmericafmnLectureUndergraduateData DiscoveryInstructional SettingAudience LevelAdvancedActivity LengthMore than 1 hour

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    Biodiversity
    Biodiversity allows the diversity of a biological population to be estimated with both the Shannon and Simpson biodiversity indices based on information theory.

    Keywords: Shannon diversity indexSimpson diversity indexBiodiversity indicesInformation theory

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    Research and Teaching Opportunities with a Large-scale Salamander Collaboration Network (SPARCnet): TWS Poster
    Poster presented at the 2020 virtual meeting of The Wildlife Society (TWS) on research and teaching opportunities with the Salamander Population and Adaptation Research Collaboration Network...

    Keywords: salamandercourse-based research experiences (CUREs)research network

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    2011-Cruz-Aponte-Herrera-Valdez-Mitigating effects of vaccination on influenza outbreaks given constraints in stockpile size and daily administrati
    We present a SIR-like model that explicitly takes into account vaccine supply and the number of vaccines administered per day and places data-informed limits on these parameters.

    Keywords: vaccinationinfectionSIRepidemic

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