Text Search:
Applied Filters
    Type II Functional Response: Holling’s Disk Equation
    This module introduces the Holling’s disk equation in the context of understanding the relationship between an individual's rate of consumption and food density. It is intended for an introductory...
    998

    views

    182

    downloads

    0

    comments

    0

    adaptations

    2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
    To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.
    186

    views

    90

    downloads

    0

    comments

    0

    adaptations

    Type I Functional Response
    This module introduces the type I functional response in the context of understanding the relationship between an individual's rate of consumption and food density. It is intended for an...
    917

    views

    195

    downloads

    0

    comments

    0

    adaptations

    2008-Jai-Li-Differential equations models for interacting wild and transgenic mosquito populations
    We formulate and study continuous-time models, based on systems of ordinary differential equations, for interacting wild and transgenic mosquito populations.
    116

    views

    31

    downloads

    0

    comments

    0

    adaptations

    2014-Chivers-EtAl-Predator-prey systems depend on a prey refuge
    We present an agent-based model which does not require the factors or constraints of previous models to reproduce all six patterns in persistent populations.
    217

    views

    43

    downloads

    0

    comments

    0

    adaptations

    2010-Kar-Chakraborty-Bioeconomic_modelling_of_a_prey_predator_system_using_differential_algebraic_equations
    We propose a biological economic model based on prey-predator dynamics where the prey species are continuously harvested and predation is considered with type II functional response.
    180

    views

    52

    downloads

    0

    comments

    0

    adaptations

    2001-Tsoularis-Analysis of logistic growth models
    variety of growth curves have been developed to model both unpredated, intraspecific population dynamics and more general biological growth. We further review and compare several such...
    131

    views

    57

    downloads

    0

    comments

    0

    adaptations

    2001-A_Tsoularis-Analysis_of_logistic_growth_models
    The paper presents an historical development of the logistic equation in its various forms, including Verhulst, Pearl and Reed, Gompertz, Bertalanffy, Richards, and others.
    139

    views

    55

    downloads

    0

    comments

    0

    adaptations

    Transpiration
    In this lab, students will examine differences between C3 and C4 plants in their transpiration rates.
    2075

    views

    527

    downloads

    0

    comments

    3

    adaptations

    Tackling "Big Data" with Biology Undergrads: A Simple RNA-seq Data Analysis Tutorial Using Galaxy
    Analyzing high-throughput DNA sequence data is a fundamental skill in modern biology. However, real and perceived barriers such as massive file sizes, substantial computational requirements, and...
    5057

    views

    914

    downloads

    0

    comments

    0

    adaptations

    Investigating Cell Signaling with Gene Expression Datasets
    Modern molecular biology is a data- and computationally-intensive field with few instructional resources for introducing undergraduate students to the requisite skills and techniques for analyzing...
    7996

    views

    398

    downloads

    0

    comments

    0

    adaptations

    Where Does Elsie's Hair Color Come From? A "De-Simplified" Pedigree Lesson
    Pedigree analysis is part of most Genetics curricula, but the examples traditionally used in genetics courses present phenotypes as if they were entirely and inexorably defined by genotype. This...
    1418

    views

    395

    downloads

    0

    comments

    0

    adaptations

    Nanoparticles and Shrimp: An Interdisciplinary Lab Series in Chemistry and Biology for Undergraduate Engineering Students
    The parallels between engineering and science are vast, as both disciplines apply theory and inquiry to solve complex problems. In order to prepare students for interdisciplinary careers in STEM,...
    1694

    views

    184

    downloads

    0

    comments

    0

    adaptations

    Application of a Bacterial Experimental Evolution System to Visualize and Teach Evolution in Action: A Course-Based Undergraduate Research Experience
    Concepts of evolution are typically taught through examples of extremely long timescales, which do not always resonate broadly. Here, we describe a course-based undergraduate research experience...
    3376

    views

    280

    downloads

    0

    comments

    0

    adaptations

    2009-Das-EtAl-Bioeconomic harvesting of a pre-predator fishery
    This paper deals with the problem of non-selective harvesting of a prey–predator system by using a reasonable catch-rate function instead of usual catch-per-unit-effort hypothesis.
    251

    views

    40

    downloads

    0

    comments

    0

    adaptations

    Using Raw Sequence Data to Analyze Tumor Suppressor Mutations
    Learning to identify DNA sequence variants from raw sequencing data (electropherograms) is a basic molecular biology skill with applications to basic research and clinical practice. Yet learning to...
    559

    views

    89

    downloads

    0

    comments

    0

    adaptations

    A Simple Method for Predicting a Molecule's Biological Properties From Its Polarity
    The distinction between very polar and less polar substances is a foundation of biochemistry, cell biology, and physiology; it surfaces in multiple concept inventories and elaborations of...
    2068

    views

    518

    downloads

    0

    comments

    0

    adaptations

    Transpiration
    In this lab, students will examine differences between C3 and C4 plants in their transpiration rates.
    1410

    views

    335

    downloads

    0

    comments

    0

    adaptations

    2016-Wilkie-EtAl-Using ODEs to Explore Cancer-Immune Dynamics and Tumor Dormancy
    Here we present a general method using ordinary differential equations (ODEs) to model and analyze cancer-immune interactions, and in particular, immune-induced tumor dormancy.
    174

    views

    56

    downloads

    0

    comments

    0

    adaptations

    Drawing “Octo-Pines”: Ice-Breaker Active-Learning Activities to Introduce Drawing-to-Learn in Biology
    Drawing has been advocated as a technique to develop visual literacy and observational skills in biology students. To increase student motivation and confidence to draw in our course, we developed...
    2053

    views

    371

    downloads

    0

    comments

    0

    adaptations