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  1. Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    2019-05-29 18:10:28 | Teaching Materials | Contributor(s): Ami Erickson | doi:10.25334/Q4H458

    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.

  2. Sequence Similarity Resource Adaptation: Exploring Ebola Virus

    Sequence Similarity Resource Adaptation: Exploring Ebola Virus

    2019-05-16 20:29:12 | Teaching Materials | Contributor(s): William Tapprich | doi:10.25334/Q47X63

    This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.

  3. Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    2019-05-02 18:42:15 | Teaching Materials | Contributor(s): Adam Kleinschmit, Benita Brink, Steven Roof, Carlos Christopher Goller, Sabrina Robertson | doi:10.25334/Q4G45Z

    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

  4. Colon Cancer: A Case of Genetic Bad Luck

    Colon Cancer: A Case of Genetic Bad Luck

    2019-01-03 16:43:30 | Teaching Materials | Contributor(s): Anne M. Casper | doi:10.25334/Q4WT7B

    Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science

  5. Bioinformatics: An Interactive Introduction to NCBI

    Bioinformatics: An Interactive Introduction to NCBI

    2019-01-03 16:03:45 | Teaching Materials | Contributor(s): Seth Bordenstein | doi:10.25334/Q4915C

    Modules showing how the NCBI database classifies and organizes information on DNA sequences, evolutionary relationships, and scientific publications. And a module working to identify a nucleotide sequence from an insect endosymbiont by using BLAST

  6. BSL-4: Authorized Personnel Only

    BSL-4: Authorized Personnel Only

    2018-09-24 14:48:29 | Teaching Materials | Contributor(s): Nicole Anthony | doi:10.25334/Q4QX52

    National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection

  7. Using DNA Subway to Analyze Sequence Relationships

    Using DNA Subway to Analyze Sequence Relationships

    2018-05-30 14:32:27 | Teaching Materials | Contributor(s): Jason Williams, Ray A. Enke, Oliver Hyman, Emily Lescak, Sam S Donovan, William Tapprich, Elizabeth F Ryder | doi:10.25334/Q4J111

    This is a bioinformatics exercise using the DNA Subway Blue Line, a user-friendly pipeline of bioinformatics tools, to analyze a collection of mosquito DNA bar-code sequences.

  8. Intro to DNA Barcoding

    Intro to DNA Barcoding

    2018-05-28 22:13:51 | Teaching Materials | Contributor(s): Oliver Hyman, Andrea Pesce, Elizabeth Doyle, Ray A Enke | doi:10.25334/Q4112R

    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 30-45 min lecture or lab class period.

  9. Intro to DNA Subway Blue Line

    Intro to DNA Subway Blue Line

    2018-05-28 22:04:34 | Teaching Materials | Contributor(s): Oliver Hyman, Andrea Pesce, Elizabeth Doyle, Ray A Enke | doi:10.25334/Q48H7N

    This is a classroom tested introductory lesson & activity to introduce DNA Barcoding and DNA Subway Blue Line. It is for novices and will fit into a 1 hr 50 min lecture or lab class period.

  10. How to Use BLASTP NCBI

    How to Use BLASTP NCBI

    2018-04-12 00:40:07 | Teaching Materials | Contributor(s): Laura Harris | doi:10.25334/Q4G68S

    A walk through on how to find protein sequences and use BLASTP and PSI-BLAST in NCBI.

  11. DNA Subway Learning Resources

    DNA Subway Learning Resources

    2017-10-18 16:08:06 | Teaching Materials | Contributor(s): Jason Williams | doi:10.25334/Q45D5X

    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.