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  1. A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!

    A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!

    2019-06-07 20:09:22 | Teaching Materials | Contributor(s): Rachael St. Jacques, Max Maza, Sabrina Robertson, Guoqing Lu, Andrew Lonsdale, Ray A Enke | doi:10.25334/Q4D172

    This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.

  2. Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    2019-05-29 18:10:28 | Teaching Materials | Contributor(s): Ami Erickson | doi:10.25334/Q4H458

    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.

  3. Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    2019-05-02 18:42:15 | Teaching Materials | Contributor(s): Adam Kleinschmit, Benita Brink, Steven Roof, Carlos Christopher Goller, Sabrina Robertson | doi:10.25334/Q4G45Z

    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.