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  1. Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE): Recent Activities

    Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE): Recent Activities

    2019-06-11 22:24:19 | Teaching Materials | Contributor(s): William Morgan | doi:10.25334/Q4J45K

    Presentation on NIBLSE at the 2019 Great Lakes Bioinformatics Conference

  2. Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach

    2019-05-29 18:10:28 | Teaching Materials | Contributor(s): Ami Erickson | doi:10.25334/Q4H458

    This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.

  3. NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources

    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources

    2019-05-21 14:02:52 | Teaching Materials | Contributor(s): Michael Sierk, Sam S Donovan, Bill Morgan, Hayley Orndorf, Mark A. Pauley, Sabrina Robertson, Elizabeth F Ryder, William Tapprich | doi:10.25334/Q4QX7T

    Presentation on NIBLSE incubators at the 2019 Great Lakes Bioinformatics Conference

  4. Sequence Similarity Resource Adaptation: Exploring Ebola Virus

    Sequence Similarity Resource Adaptation: Exploring Ebola Virus

    2019-05-16 20:29:12 | Teaching Materials | Contributor(s): William Tapprich | doi:10.25334/Q47X63

    This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.

  5. Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

    2019-05-02 18:42:15 | Teaching Materials | Contributor(s): Adam Kleinschmit, Benita Brink, Steven Roof, Carlos Christopher Goller, Sabrina Robertson | doi:10.25334/Q4G45Z

    This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

  6. NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources

    NIBLSE Incubators: A community-based model for the development of bioinformatics learning resources

    2019-03-29 13:35:26 | Teaching Materials | Contributor(s): Michael Sierk, Sam S Donovan, Bill Morgan, Hayley Orndorf, Mark A. Pauley, Sabrina Robertson, Elizabeth F Ryder, William Tapprich | doi:10.25334/Q4XF1K

    Presentation given at GLBIO 2019 on NIBLSE Incubators

  7. Development of the NIBLSE Learning Resource Collection and Incubators

    Development of the NIBLSE Learning Resource Collection and Incubators

    2018-03-16 18:09:00 | Teaching Materials | Contributor(s): Bill Morgan, Sam S Donovan, Hayley Orndorf, Sabrina Robertson, Elizabeth Ryder, Michael Sierk, Anne Rosenwald, Liz Dinsdale, Eric Triplett, Mark A. Pauley, William Tapprich | doi:10.25334/Q4TX1G

    Talk on the NIBLSE Resource Collection and Incubators given at several professional development confernces

  8. Incubators: A community based model for improving the usability of bioinformatics learning resources

    Incubators: A community based model for improving the usability of bioinformatics learning resources

    2018-01-19 18:49:19 | Teaching Materials | Contributor(s): Hayley Orndorf, Bill Morgan, Neal Grandgenett, Mark A. Pauley, Elizabeth Ryder, Michael Sierk, Robin Wright, Anne Rosenwald, Liz Dinsdale, Eric Triplett, Sam S Donovan | doi:10.25334/Q4KQ30

    Poster on Incubators, a NIBLSE and QUBES collaboration presented at Great Lakes Bioinformatics Conference - Chicago, IL

  9. Exploring HIV Evolution

    Exploring HIV Evolution

    2017-06-05 20:10:58 | Teaching Materials | Contributor(s): Sam S Donovan, Tony Weisstein

    In this activity you will study aspects of sequence evolution by working with a set of HIV sequence data from 15 different subjects (Markham, et al., 1998). You will first learn about the dataset, then study the possible sources of HIV for these...

  10. Needleman - Wunsch Algorithm Exercise

    Needleman - Wunsch Algorithm Exercise

    2017-06-05 20:09:17 | Teaching Materials | Contributor(s): Michael Sierk

    This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.

  11. RNA-seq Analysis

    RNA-seq Analysis

    2017-06-05 20:07:13 | Teaching Materials | Contributor(s): Bill Morgan, Matthew Reeder

    In this computer lab module, students learn how to process an RNA-seq data set to identify differentially expressed genes (DEGs). The samples for this data set were collected from yeast cells expressing either a control gene or a pathogen...

  12. Teaching Material Incubators

    Teaching Material Incubators

    2017-01-10 18:07:37 | Datasets | Contributor(s): Sam S Donovan

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