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  1. POPULUS Evolutionary forces

    03 Feb 2015 | Teaching & Reference Material | Contributor(s): Jonathan M. Brown

    This lab is focused on understanding how evolutionary forces - including mutation, genetic drift, migration, and selection - result in changes in population allele frequencies.  

  2. A quick tour of IONTW

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Winfried Just, Ying Xin

    In this module we guide you through some of the capabilities of IONTW. Highlights include the types of networks supported, setting up various types of models of disease transmission, observing the resulting dynamics, and collecting statistics on the outcomes. Along the way, the module also...

  3. A quick tour of IONTW

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Winfried Just, Ying Xin

    In this module we guide you through some of the capabilities of IONTW. Highlights include the types of networks supported, setting up various types of models of disease transmission, observing the resulting dynamics, and collecting statistics on the outcomes. Along the way, the module also...

  4. Population Growth

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Miles Silman

    Lab exercise in which students model both discrete and continuous density-independent growth. Students also model discrete and time-lagged density-dependent growth. General questions are provided at the end.

  5. Population Growth

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Miles Silman

    Lab exercise in which students model both discrete and continuous density-independent growth. Students also model discrete and time-lagged density-dependent growth. General questions are provided at the end.

  6. Lotka-Volterra, the logistic equation, and Isle Royale

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Stephen Malcolm

    Students work through the basic Lotka-Volterra predator prey model using an example in which the prey exhibit density independence.  Students then incorporate density dependence of prey items using several different features of Populus.

  7. Lotka-Volterra, the logistic equation, and Isle Royale

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Stephen Malcolm

    Students work through the basic Lotka-Volterra predator prey model using an example in which the prey exhibit density independence.  Students then incorporate density dependence of prey items using several different features of Populus.

  8. POPULUS Genetic Drift Computer Simulation

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Joanna Vondrasek, Janis Antonovics, Doug Taylor

    A stand-alone lab exercise developed for the Evolution course at the University of Virginia. Explores the effects of population size and initial allele frequency on the loss/fixation of alleles.  

  9. POPULUS Genetic Drift Computer Simulation

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Joanna Vondrasek, Janis Antonovics, Doug Taylor

    A stand-alone lab exercise developed for the Evolution course at the University of Virginia. Explores the effects of population size and initial allele frequency on the loss/fixation of alleles.  

  10. SUMS4Bio - Video tutorials in math and stats for biology students

    27 Jan 2015 | Teaching & Reference Material | Contributor(s): Jeremy M Wojdak, Caleb Adams, Daniel Cole Metz

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/747This website features an array of short video tutorials on ideas covered in Radford University's Math4Bio and Stats4Bio courses. Some videos cover concepts, while...

  11. SUMS4Bio - Video tutorials in math and stats for biology students

    27 Jan 2015 | Teaching & Reference Material | Contributor(s): Jeremy M Wojdak, Caleb Adams, Daniel Cole Metz

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/747This website features an array of short video tutorials on ideas covered in Radford University's Math4Bio and Stats4Bio courses. Some videos cover concepts, while...

  12. OpenIntro

    24 Jan 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/889OpenIntro was started with one goal in mind: create a free and open-source introductory textbook. The mission of OpenIntro is to make educational products that...

  13. OpenIntro

    24 Jan 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/889OpenIntro was started with one goal in mind: create a free and open-source introductory textbook. The mission of OpenIntro is to make educational products that...

  14. OpenIntro

    24 Jan 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/889OpenIntro was started with one goal in mind: create a free and open-source introductory textbook. The mission of OpenIntro is to make educational products that...

  15. Brainstorming ideas

    24 Jan 2015 | Teaching & Reference Material | Contributor(s): Lisa Limeri, Sam S Donovan, Tim Mackie, Lauren Bakale, Amanda Riley, Gabriel da Silva Pescador

    A list of ideas we brainstormed in class on 22-Jan-2015 for our group project with Unity.

  16. Project MOSAIC

    23 Jan 2015 | Teaching & Reference Material | Contributor(s): Daniel Kaplan, Karl-Dieter Crisman, Nicholas Horton, Eric Marland, Randall Pruim

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/825From the project website: Project MOSAIC is a community of educators working to develop a new way to introduce mathematics, statistics, computation and modeling...

  17. Project MOSAIC

    23 Jan 2015 | Teaching & Reference Material | Contributor(s): Daniel Kaplan, Karl-Dieter Crisman, Nicholas Horton, Eric Marland, Randall Pruim

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/825From the project website: Project MOSAIC is a community of educators working to develop a new way to introduce mathematics, statistics, computation and modeling...

  18. statsTeachR

    23 Jan 2015 | Teaching & Reference Material | Contributor(s): Nicholas Reich, Andrea Foulkes, Harrel Blatt, Eric Cohen, Gregory Matthews

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/781From the project website:What is statsTeachR?statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching...

  19. statsTeachR

    23 Jan 2015 | Teaching & Reference Material | Contributor(s): Nicholas Reich, Andrea Foulkes, Harrel Blatt, Eric Cohen, Gregory Matthews

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/781From the project website:What is statsTeachR?statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching...

  20. Advancing population ecology with integral projection models: a practical guide

    23 Jan 2015 | Teaching & Reference Material | Contributor(s): Cory Merow, Johan Dahlgren, Jessica Metcalf, Dylan Childs, Margaret Evans, Eelke Jongejans, Sydne Record, Mark Rees, Roberto Salguero-Gómez, Sean McMahon

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/824Integral projection models (IPMs) use information on how an individual's state influences its vital rates – survival, growth and reproduction – to...