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  1. Introduction to Probability, Statistics, and Random Processes

    07 Nov 2016 | Teaching & Reference Material | Contributor(s): Hossein Pishro-Nik

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/896Check out the textbook called Introduction to Probability, Statistics, and Random Processes by Hossein Pishro-Nik. From the website: "It is an open access...

  2. Introduction to Quantitative Biology - Fall 2014 Syllabus

    05 Jan 2015 | Teaching & Reference Material | Contributor(s): Drew LaMar

    This resource has been updated - find the current version here: https://qubeshub.org/publications/240This course will be an overview of the mathematical tools used in quantitative analysis and modeling of biological systems. The goal is to develop quantitative reasoning skills through the...

  3. Introductory Science and Mathematics Education for 21st-Century Biologists

    24 Feb 2015 | Teaching & Reference Material | Contributor(s): William Bialek, David Botstein

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/830Article abstract:  "Galileo wrote that “the book of nature is written in the language of mathematics”; his quantitative approach to understanding the...

  4. Investigating the Footprint of Climate Change on Phenology and Ecological Interactions in North-Central North America

    23 Sep 2015 | Teaching & Reference Material | Contributor(s): Kellen M. Calinger

    This resource has been updated - find the current version here: https://qubeshub.org/publications/267The Ecological QuestionHave long-term temperatures changed throughout Ohio? How will these temperature changes impact plant and animal phenology, ecological interactions, and, as a result,...

  5. IQS 2.0: A Modularized Integrated Math and Science Course

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Lester Caudill

    This resource has been updated - find the current version here: https://qubeshub.org/publications/252For the past several years, the University of Richmond has offered an Integrated Quantitative Science (IQS) course, integrating introductory courses in five math and science disciplines, to...

  6. IQS 2.0: A Modularized Integrated Math and Science Course

    21 Oct 2015 | Teaching & Reference Material | Contributor(s): Lester Caudill

    This resource has been updated - find the current version here: https://qubeshub.org/publications/252For the past several years, the University of Richmond has offered an Integrated Quantitative Science (IQS) course, integrating introductory courses in five math and science disciplines, to...

  7. Joel E. Greengiant Learns About Peas: From Nucleotides to Selection

    17 Jun 2015 | Teaching & Reference Material | Contributor(s): Merle Heidemann, Peter J.T. White, Jim Smith

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/845This case study follows purveyors of peas, Joel E. and Jolene Greengiant, as they learn about the origin, biochemistry, genetics and eventual artificial selection of sweet...

  8. Linear models and linear mixed effects models in R: Tutorial 1

    24 Apr 2015 | Teaching & Reference Material | Contributor(s): Bodo Winter

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/832Linear models and linear mixed models are an impressively powerful and flexible tool for understanding the world. This tutorial is the first of two tutorials that introduce...

  9. Linked Genes and Recombination: Advanced Punnett Squares

    12 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Karen Nelson

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/743An online module in which students learn about more difficult genetics problems, including linked genes and crossing over. Quantitatively students learn about marginal...

  10. List of models in which observed patterns are Important

    02 Aug 2015 | Teaching & Reference Material | Contributor(s): Steven F Railsback, Volker Grimm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/876Supplemental material for Chapter 18 of Agent-Based and Individual-Based Modeling: A practical introduction by Railsback and Grimm (2012).   This is a list of...

  11. Lotka-Volterra, the logistic equation, and Isle Royale

    30 Jan 2015 | Teaching & Reference Material | Contributor(s): Stephen Malcolm

    Students work through the basic Lotka-Volterra predator prey model using an example in which the prey exhibit density independence.  Students then incorporate density dependence of prey items using several different features of Populus.

  12. Luria-Delbruck

    14 Sep 2015 | Teaching & Reference Material | Contributor(s): Tony Weisstein, John R Jungck, Doug Green

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/777These two workbooks model the evolution of phage resistance in a bacterial population under two alternative hypotheses. Under the hypothesis of acquired immunity, mutation...

  13. Manual for Using BIRDD

    19 Nov 2015 | Teaching & Reference Material | Contributor(s): Sam S Donovan, Frank Price

    This resource has been updated - find the current version here: https://qubeshub.org/publications/214This document contains all of the database notes and How-To files from within BIRDD. These can be printed to provide a "manual" for students to refer to. Instructors can distribute...

  14. Map Your Hazards

    20 Aug 2015 | Teaching & Reference Material | Contributor(s): Brittany Brand, Melissa Schlegel, Pamela McMullin-Messier

    This resource has been updated - find the current version here: http://qubeshub.org/publications/292This interdisciplinary module allows students to understand societal impacts that result from natural hazards and gain insight into how our knowledge and perspectives of the world shape how we...

  15. Marriage age model ODD

    02 Aug 2015 | Teaching & Reference Material | Contributor(s): Steven F Railsback, Volker Grimm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/869This is a supplemental resource from Agent-based and Individual-based Modeling: a practical introduction By Railsback and Grimm (2012). This is an...

  16. Math Bench Probability and Statistics: Basic Rules of Probability

    07 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Kären Nelson

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/741This is an online activity that explains basic concepts of probability. Some concepts introduced include when to add or multiply probabilities, and independent and...

  17. Math Bench Probability and Statistics: Mice with Fangs - Intro to Punnett Squares

    14 Jan 2015 | Teaching & Reference Material | Contributor(s): Dr. Kaci Thompson, Dr. Kären Nelson

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/744This is an online activity that provides an introduction to Punnett squares as a tool for visualizing genetic inheritance. The ratios of possible genotypes and phenotypes...

  18. MathBench Biology Modules

    13 Mar 2015 | Teaching & Reference Material | Contributor(s): Katerina V. Thompson, Kären C. Nelson, Gili Marbach-Ad, Michael Keller, William F. Fagan, Patricia A. Shields

    Modules designed to help students understand the math behind the material learned in introductory ecology courses. 

  19. Mathematical models and theorems

    01 Feb 2017 | Teaching & Reference Material | Contributor(s): Winfried Just

    In this module we introduce and compare various types of deterministic and stochastic mathematical models of disease transmission. We then illustrate how one can derive predictions of these models in the form of mathematical theorems.Level: Advanced undergraduate and graduate students of...

  20. Mathematics for Biologists Problem Workbook

    27 Feb 2015 | Teaching & Reference Material | Contributor(s): Juergen Gerlach

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/748This is a workbook of solved problems created by Dr. Juergen Gerlach at Radford University, for  students in Math 119 - Mathematics for Biologists.   He is...