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  1. Cookbook for R

    10 Jan 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/780The goal of the cookbook is to provide solutions to common tasks and problems in analyzing data.

  2. Counting the Forest and the Trees: Quantitative Undergraduate Biology Education and Synthesis (QUBES) is a tool for Vision and Change

    27 Jul 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/228/Vision and Change stressed the importance of quantitative skills for the future of science in the United States. In response to this plea, biologists and mathematicians came together to...

  3. Course materials for computational genomics using R

    19 Nov 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/907The R code and data are deposited at Github: https://github.com/hongqin/RCompBio 

  4. Dairy Farm Mathematics

    09 Jul 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/783From the website:We based our instructional unit on the premise that many people have, that one does not need mathematics if the they do not plan on attending...

  5. Data Analysis for the Life Sciences

    25 Sep 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/841An online stats book written completely in R!From the authors:"Data analysis is now part of practically every research project in the life sciences. In this...

  6. Data Nuggets - Bringing Real Data into the Classroom to Unearth Students' Quantitative & Inquiry Skills

    22 Jan 2015 | Teaching & Reference Material

    Data Nuggets are narratives about real research, featuring the principal scientist, that include data students can analyze.   Right now they are aimed at K-12 students, but many topics covered are taught in college courses, and there is no limit to what mathematical or statistical concepts...

  7. DataCamp

    06 Nov 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/913The Easiest Way to Learn Data Science OnlineMaster data analysis from the comfort of your browser, at your own pace, tailored to your needs and expertise. Whether...

  8. DataONE Module 01: Why Data Management?

    03 Jan 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/911Trends in data collection, storage and loss, the importance and benefits of data management, and an introduction to the data life cycle.Slides (PPTX)One page...

  9. DataONE Module 02: Data Sharing

    02 Jan 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/909Data sharing in the context of the data life cycle, the value of sharing data, concerns about sharing data, and methods and best practices for sharing data.Slides...

  10. DataONE Module 03: Data Management Planning

    03 Jan 2016 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/910Benefits of a data management plan (DMP), DMP components, tools for creating a DMP, NSF DMP information, and a sample DMP.Slides (PPTX)One page handout...

  11. Design, Implementation, and Evaluation of Faculty Mentoring Networks: A Model for Promoting Faculty Teaching Scholarship

    06 Apr 2017 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/199NGSS, AP Biology, and Vision & Change all highlight the importance of quantitative skills to understanding biology. The Quantitative Undergraduate Biology Education and Synthesis (QUBES,...

  12. Differential equation models of disease transmission

    10 May 2015 | Teaching & Reference Material

    In this module we explore ODE models of disease transmission and compare some of their predictions with those of agent-based models. Parts of this material will be referenced in later modules.Level: Advanced undergraduate and graduate students of mathematics or biology.DownloadStudent copy (no...

  13. Discrete Math Modeling with Biological Applications (Course Materials)

    29 Jun 2015 | Teaching & Reference Material

    This resource has updated versions:Version 1.0 (2018) https://qubeshub.org/qubesresources/publications/749/1Version 2.0 (2019) https://qubeshub.org/qubesresources/publications/749/2 -- This version no longer has the Agent-Based Modeling materialsThese are the...

  14. Disease Spread

    22 Nov 2015 | Teaching & Reference Material

    An activity in which students model the spread of disease using one differential equation. 

  15. Disease Spread Simulation with M&M's and Information on the wider SIMIODE community

    03 Jul 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/358This is a Student Version of a Modeling Scenario from the community, SIMIODE - Systemic Initiative for Modeling Investigations and Opportunities with Differential Equations at...

  16. Do Cell Phones Cause Brain Tumors?

    06 Feb 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/890https://www.youtube.com/watch?v=wU5XkhUGzBs

  17. Draft Version: Energy Balance Models

    11 Mar 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here:  https://qubeshub.org/qubesresources/publications/863This module introduces the student to the process of mathematical modeling. It shows how the process starts in the 4real world! with a...

  18. Drivers of Avian Local Species Richness: Continental-Scale Gradients, Regional Landscape, or Local Land Cover?

    27 Mar 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/269An ecology laboratory focusing upon the concept of species richness and its study.From the module:  Students learn how to test hypotheses related to the local, regional, and continental...

  19. E. coli Citrate Use

    24 Aug 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/publications/357Bacteria are excellent model organisms for studying evolution.  They are easy to grow, maintain, and handle under very controlled conditions.  Even more importantly for evolution...

  20. Ecology and Epidemiology in R

    09 May 2015 | Teaching & Reference Material

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/837