All Categories (1-20 of 57)

1. 2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon

   08 Apr 2023 | Teaching Materials | Contributor(s):

   By Erin Boggess

   NA

   To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.

   https://qubeshub.org/publications/4127/?v=1

2. Additional examples of pattern-oriented theory development

   Collections | 19 Sep 2015 | Posted by Drew LaMar

   https://qubeshub.org/community/groups/introquantbio/collections/primary-and-news-articles

3. Agent-based and Individual-based Modeling: A Practical Introduction

   out of 5 stars 

   03 Jun 2015 | | Contributor(s):: Steven F Railsback, Volker Grimm

   From the authors website:  "We designed this book to fill the need for an introductory text on agent-based modeling for scientists, for use both in university courses (graduate or upper level undergraduate) and by people teaching themselves. The book is not specific to any particular...

4. Agent-Based Modeling Course Materials

   29 Jan 2019 | Teaching Materials | Contributor(s):

   By Erin N. Bodine

   Rhodes College

   Materials created for an upper level ABM course. Prerequisite: Students have taken either (a) another modeling course, or (b) the introductory computer science sequence.

   https://qubeshub.org/publications/1030/?v=1

5. 

   alessia melegaro

   https://qubeshub.org/community/members/3181

6. 

   Alex Capaldi

   https://qubeshub.org/community/members/2524

7. Amazing Sheep Cyclone Caught On Camera - Must Watch

   Collections | 04 Sep 2015 | Posted by Drew LaMar

   https://qubeshub.org/community/groups/introquantbio/collections/agent-based-modeling

8. An introduction to agent-based modeling.

   out of 5 stars 

   02 Aug 2015 | | Contributor(s):: Marco A Janssen

   This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/849This is a textbook at an introductory level suitable for undergraduates, provided by Marco Janssen. From the book's Preface: This textbook...

9. An Introduction to agent-based modeling.

   23 Oct 2018 | Teaching Materials | Contributor(s):

   By Marco A Janssen

   Arizona State University

   Introductory level textbook based on a collection of lecture notes from an undergraduate course on agent-based modeling at Arizona State University.

   https://qubeshub.org/publications/849/?v=1

10. 

    Anne Elizabeth Yust

    https://qubeshub.org/community/members/8345

11. 

    Anya Vostinar

    https://qubeshub.org/community/members/18980

12. 

    Bailie Lavan

    https://qubeshub.org/community/members/8474

13. Bees? -- Variables/Parameters Part I

    04 Nov 2015 | Posted by Adam Reiss

    For the caffeinated forage/bee dancing behavior study, I will program an agent-based model in NetLogo with certain variables and parameters. There was a similar agent-based model created from which...

    https://qubeshub.org/community/groups/introquantbio/blog/2015/11/bees-----variablesparameters-part-i

14. Being the turtle: agent-based modeling workshop at Humboldt State University

    06 Aug 2015 | Posted by Jeremy M Wojdak

    What could bring ecologists, toxicologists, philosophers, and sociologists, Ph.D. students, professors, and federal agency scientists together, 300 miles from nowhere? Turtles. Yes, that's...

    https://qubeshub.org/news/blog/2015/08/being-the-turtle-agent-based-modeling-workshop-at-humboldt-state-university

15. Breeding synchrony in colonial birds: from local stress to global harmony

    out of 5 stars 

    02 Aug 2015 | | Contributor(s):: Roger Jovani, Volker Grimm

    This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...

16. Breeding synchrony in colonial birds: from local stress to global harmony

    25 Oct 2018 | Teaching Materials | Contributor(s):

    By Volker Grimm, Roger Jovani¹

    Helmholtz Center for Environmental Research

    This is a supplemental resource for ABM

    https://qubeshub.org/publications/871/?v=1

17. COVID-19 Spread NetLogo ABM

    25 Jun 2023 | Teaching Materials | Contributor(s):

    By Anne Elizabeth Yust¹, Saharsh Talwar²

    1. The New School 2. University of Pittsburgh

    This project aimed to utilize agent-based modeling in NetLogo to create a simulation of COVID-19 spread in a traditional college classroom. The model allows for an evaluation of different...

    https://qubeshub.org/publications/4451/?v=1

18. Differential equation models of disease transmission

    out of 5 stars 

    10 May 2015 | | Contributor(s):: Winfried Just, Hannah Lea Callender

    In this module we explore ODE models of disease transmission and compare some of their predictions with those of agent-based models. Parts of this material will be referenced in later modules.Level: Advanced undergraduate and graduate students of mathematics or biology.DownloadStudent copy (no...

19. Discrete Math Modeling with Biological Applications (Course Materials)

    out of 5 stars 

    29 Jun 2015 | | Contributor(s):: Erin N. Bodine

    This resource has updated versions:Version 1.0 (2018) https://qubeshub.org/qubesresources/publications/749/1Version 2.0 (2019) https://qubeshub.org/qubesresources/publications/749/2 -- This version no longer has the Agent-Based Modeling materialsThese are the...

20. Discrete Math Modeling with Biological Applications (Course Materials)

    26 Apr 2019 | Teaching Materials | Contributor(s):

    By Carrie Diaz Eaton

    Bates College and RIOS Institute

    These are the materials for Math 214 offered at Rhodes College.

    https://qubeshub.org/publications/765/?v=1