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2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
08 Apr 2023 | Teaching Materials | Contributor(s):
By Erin Boggess
NA
To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.
https://qubeshub.org/publications/4127/?v=1
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Additional examples of pattern-oriented theory development
Collections |
19 Sep 2015 |
Posted by Drew LaMar
https://qubeshub.org/community/groups/introquantbio/collections/primary-and-news-articles
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Agent-based and Individual-based Modeling: A Practical Introduction
03 Jun 2015 | | Contributor(s):: Steven F Railsback, Volker Grimm
From the authors website: "We designed this book to fill the need for an introductory text on agent-based modeling for scientists, for use both in university courses (graduate or upper level undergraduate) and by people teaching themselves. The book is not specific to any particular...
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Agent-Based Modeling Course Materials
29 Jan 2019 | Teaching Materials | Contributor(s):
By Erin N. Bodine
Rhodes College
Materials created for an upper level ABM course. Prerequisite: Students have taken either (a) another modeling course, or (b) the introductory computer science sequence.
https://qubeshub.org/publications/1030/?v=1
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alessia melegaro
https://qubeshub.org/community/members/3181
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Alex Capaldi
https://qubeshub.org/community/members/2524
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Amazing Sheep Cyclone Caught On Camera - Must Watch
Collections |
04 Sep 2015 |
Posted by Drew LaMar
https://qubeshub.org/community/groups/introquantbio/collections/agent-based-modeling
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An introduction to agent-based modeling.
02 Aug 2015 | | Contributor(s):: Marco A Janssen
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/849This is a textbook at an introductory level suitable for undergraduates, provided by Marco Janssen. From the book's Preface: This textbook...
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An Introduction to agent-based modeling.
23 Oct 2018 | Teaching Materials | Contributor(s):
By Marco A Janssen
Arizona State University
Introductory level textbook based on a collection of lecture notes from an undergraduate course on agent-based modeling at Arizona State University.
https://qubeshub.org/publications/849/?v=1
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Anne Elizabeth Yust
https://qubeshub.org/community/members/8345
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Anya Vostinar
https://qubeshub.org/community/members/18980
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Bailie Lavan
https://qubeshub.org/community/members/8474
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Bees? -- Variables/Parameters Part I
04 Nov 2015 |
Posted by Adam Reiss
For the caffeinated forage/bee dancing behavior study, I will program an agent-based model in NetLogo with certain variables and parameters. There was a similar agent-based model created from which...
https://qubeshub.org/community/groups/introquantbio/blog/2015/11/bees-----variablesparameters-part-i
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Being the turtle: agent-based modeling workshop at Humboldt State University
06 Aug 2015 |
Posted by Jeremy M Wojdak
What could bring ecologists, toxicologists, philosophers, and sociologists, Ph.D. students, professors, and federal agency scientists together, 300 miles from nowhere? Turtles. Yes, that's...
https://qubeshub.org/news/blog/2015/08/being-the-turtle-agent-based-modeling-workshop-at-humboldt-state-university
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Breeding synchrony in colonial birds: from local stress to global harmony
02 Aug 2015 | | Contributor(s):: Roger Jovani, Volker Grimm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...
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Breeding synchrony in colonial birds: from local stress to global harmony
25 Oct 2018 | Teaching Materials | Contributor(s):
By Volker Grimm, Roger Jovani1
Helmholtz Center for Environmental Research
This is a supplemental resource for ABM
https://qubeshub.org/publications/871/?v=1
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COVID-19 Spread NetLogo ABM
25 Jun 2023 | Teaching Materials | Contributor(s):
By Anne Elizabeth Yust1, Saharsh Talwar2
1. The New School 2. University of Pittsburgh
This project aimed to utilize agent-based modeling in NetLogo to create a simulation of COVID-19 spread in a traditional college classroom. The model allows for an evaluation of different...
https://qubeshub.org/publications/4451/?v=1
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Differential equation models of disease transmission
10 May 2015 | | Contributor(s):: Winfried Just, Hannah Lea Callender
In this module we explore ODE models of disease transmission and compare some of their predictions with those of agent-based models. Parts of this material will be referenced in later modules.Level: Advanced undergraduate and graduate students of mathematics or biology.DownloadStudent copy (no...
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Discrete Math Modeling with Biological Applications (Course Materials)
29 Jun 2015 | | Contributor(s):: Erin N. Bodine
This resource has updated versions:Version 1.0 (2018) https://qubeshub.org/qubesresources/publications/749/1Version 2.0 (2019) https://qubeshub.org/qubesresources/publications/749/2 -- This version no longer has the Agent-Based Modeling materialsThese are the...
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Discrete Math Modeling with Biological Applications (Course Materials)
26 Apr 2019 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton
Bates College and RIOS Institute
These are the materials for Math 214 offered at Rhodes College.
https://qubeshub.org/publications/765/?v=1