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Bioinformatics: CpG Islands
17 Oct 2017 | Teaching Materials | Contributor(s):
By Edward Himelblau
California Polytechnic State University
This is an introductory bioinformatics exercise intended for use in a genetics course.
https://qubeshub.org/publications/147/?v=1
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Bioinformatics: Investigating Sequence Similarity - A Plant Biology Approach
29 May 2019 | Teaching Materials | Contributor(s):
By Ami Erickson
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein...
https://qubeshub.org/publications/1247/?v=1
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Box of Lessons: A Toolkit for Introducing Students to Biomolecular Structure and Function
30 Oct 2023 | Teaching Materials | Contributor(s):
By Sheela Vemu1, Alexandra Pettit2, Shuchismita Dutta3
1. Waubonsee Community College 2. Carleton University 3. RCSB Protein Data Bank, Rutgers University
This is a poster describing a collection of open educational resources that were developed by faculty participating in the Molecular CaseNet Faculty Mentoring Network in Spring 2022. The collection...
https://qubeshub.org/publications/4549/?v=1
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BSL-4: Authorized Personnel Only
15 Mar 2023 | Teaching Materials | Contributor(s):
By Nicole Anthony
Biological Sciences, Toronto District School Board
National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection
https://qubeshub.org/publications/795/?v=2
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BSL-4: Authorized Personnel Only
17 Aug 2020 | Teaching Materials | Contributor(s):
By Nicole Anthony
Biological Sciences, Toronto District School Board
National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection
https://qubeshub.org/publications/795/?v=1
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Colon Cancer: A Case of Genetic Bad Luck
15 Mar 2023 | Teaching Materials | Contributor(s):
By Anne M. Casper
Eastern Michigan University
Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science
https://qubeshub.org/publications/992/?v=2
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Colon Cancer: A Case of Genetic Bad Luck
03 Jan 2019 | Teaching Materials | Contributor(s):
By Anne M. Casper
Eastern Michigan University
Case study developed for an introductory genetics class published in the National Center for Case Study Teaching in Science
https://qubeshub.org/publications/992/?v=1
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Complete Set of Lessons
01 Nov 2018 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with...
https://qubeshub.org/publications/860/?v=1
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CRISPR/Cas9 in yeast: a multi-week laboratory exercise for undergraduate students
28 Aug 2021 | Teaching Materials | Contributor(s):
By Randi J Ulbricht*
Missouri State University
Providing undergraduate life-science students with a course-based research experience that utilizes cutting-edge technology, is tractable for students, and is manageable as an instructor is a...
https://qubeshub.org/publications/2635/?v=1
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CURE-all: Large Scale Implementation of Authentic DNA Barcoding Research into First-Year Biology Curriculum
28 Aug 2021 | Teaching Materials | Contributor(s):
By Oliver Hyman*1, Elizabeth Doyle1, Joseph Harsh1, Joanna Mott2, Andrea Pesce1, Bejan Rasoul1, Kyle Seifert1, Ray Enke1
1. James Madison University 2. California State University
Growing calls in science education reform have emphasized wide-scale engagement of first-year undergraduate students in authentic research experiences; however, large course enrollments, inadequate...
https://qubeshub.org/publications/2625/?v=1
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Declare and intialize arrays in Java
16 Apr 2018 | Teaching Materials | Contributor(s):
By Hong Qin
Spelman College
UTC, CPSC1100
https://qubeshub.org/publications/496/?v=1
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Developing a phylogram from computational resources.
01 Jun 2021 | Teaching Materials | Contributor(s):
By Melanie Lenahan1, Shea Cinquemani1
Raritan Valley Community College
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.
https://qubeshub.org/publications/2404/?v=1
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Development of the NIBLSE Learning Resource Collection and Incubators
16 Mar 2018 | Teaching Materials | Contributor(s):
By Bill Morgan1, Sam S Donovan2, Hayley Orndorf2, Sabrina Robertson3, Elizabeth Ryder4, Michael Sierk5, Anne Rosenwald6, Liz Dinsdale7, Eric Triplett8, Mark A. Pauley9, William Tapprich10
1. The College of Wooster 2. University of Pittsburgh 3. North Carolina State University 4. Worcester Polytechnic Institute 5. Saint Vincent College 6. Georgetown University 7. San Diego State University 8. University of Florida 9. University of Nebraska at Omaha 10. University of Nebraska - Omaha
Talk on the NIBLSE Resource Collection and Incubators given at several professional development confernces
https://qubeshub.org/publications/413/?v=1
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DNA Detective: Genotype to Phenotype. A Bioinformatics Workshop for Middle School to College.
29 Aug 2021 | Teaching Materials | Contributor(s):
By Anne L. Sternberger*1, Sarah E. Wyatt1
Ohio University
Advances in high-throughput techniques have resulted in a rising demand for scientists with basic bioinformatics skills as well as workshops and curricula that teach students bioinformatics...
https://qubeshub.org/publications/2652/?v=1
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DNA Subway Learning Resources
18 Oct 2017 | Teaching Materials | Contributor(s):
By Jason Williams
DNA Learning Center
DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.
https://qubeshub.org/publications/164/?v=2
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Expanding Undergraduate Participation in Computational Biology: Resources and Lessons Learned from a Hands-on Workshop
05 Jun 2019 | Teaching Materials | Contributor(s):
By Layla Oesper
Carleton College
Presentation on computational biology in undergraduate education at the 2019 Great Lakes Bioinformatics Conference
https://qubeshub.org/publications/1283/?v=1
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Exploration of the Human Genome by Investigation of Personalized SNPs
03 Jan 2019 | Teaching Materials | Contributor(s):
By Lani C. Keller
Quinnipiac University
To increase students' interest in their own genomes, this computer-based laboratory lesson is designed to be coupled with the opportunity for the students to be genotyped by the consumer sequencing...
https://qubeshub.org/publications/993/?v=1
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Exploring HIV Evolution
05 Jun 2017 | Teaching Materials | Contributor(s):
By Sam S Donovan1, Tony Weisstein2
1. University of Pittsburgh 2. Truman State University
In this activity you will study aspects of sequence evolution by working with a set of HIV sequence data from 15 different subjects (Markham, et al., 1998). You will first learn about the dataset,...
https://qubeshub.org/publications/24/?v=2
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Finding Selection in All the Right Places
03 Jan 2019 | Teaching Materials | Contributor(s):
By Juliet F. K. Noor, Mohamed A. F. Noor
Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource
https://qubeshub.org/publications/994/?v=1
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Foundations of Bioinformatics (BGGN-213)
13 Apr 2018 | Teaching Materials | Contributor(s):
By Barry Grant
University of California - San Diego
This first short screen-cast introduces “Foundations of Bioinformatics” (BGGN-213) course at UCSD and covers some pre-course logistics.
https://qubeshub.org/publications/475/?v=1