Teaching Materials (101-120 of 130)

1. UNR Bioinformatics Videos

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Pedro Miura

   University of Nevada, Reno

   Two videos developed by Pedro Miura about bioinformatics at UNR

   https://qubeshub.org/publications/483/?v=1

2. Northern Processing

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Pedro Miura

   University of Nevada, Reno

   Using photoshop and illustrator from tif file to make a figure

   https://qubeshub.org/publications/482/?v=1

3. Aging and Circular RNAs

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Pedro Miura

   University of Nevada, Reno

   A science FIT seminar presented to incoming freshmen at UNR

   https://qubeshub.org/publications/480/?v=1

4. Screen Casts for Foundations of Bioinformatics at UCSD

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Barry Grant

   University of California - San Diego

   Collection of videos developed by Barry Grant at UCSD for his course, BGGN-213

   https://qubeshub.org/publications/479/?v=1

5. Using Jetstream for Bioinformatics

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Barry Grant

   University of California - San Diego

   A pre-class screencast for UCSD’s Foundations of Bioinformatics course (BGGN-213).

   https://qubeshub.org/publications/478/?v=1

6. How do we do Bioinformatics?

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Barry Grant

   University of California - San Diego

   A description of the computational setup for “Foundations of Bioinformatics” (BGGN-213) See: http://thegrantlab.org/bggn213/

   https://qubeshub.org/publications/477/?v=1

7. What is Bioinformatics?

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Barry Grant

   University of California - San Diego

   This second screencast introduces bioinformatics, details major leaning goals & expectations of BGGN-213 and outlines the areas of bioinformatics covered in ...

   https://qubeshub.org/publications/476/?v=1

8. Foundations of Bioinformatics (BGGN-213)

   13 Apr 2018 | Teaching Materials | Contributor(s):

   By Barry Grant

   University of California - San Diego

   This first short screen-cast introduces “Foundations of Bioinformatics” (BGGN-213) course at UCSD and covers some pre-course logistics.

   https://qubeshub.org/publications/475/?v=1

9. Video Tutorials for Computational Genomics

   12 Apr 2018 | Teaching Materials | Contributor(s):

   By Laura Harris

   Davenport University

   YouTube videos by Laura Harris on a variety of genomics and bioinformatics topics.

   https://qubeshub.org/publications/472/?v=1

10. ProteinPhysiochemistry

    11 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    How to determine physiochemical features of proteins using ExPasy Protpram, SOSUI server, and PSortB programs.

    https://qubeshub.org/publications/467/?v=1

11. LEAGSEA

    11 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    How to perform Leading Edge Analysis in Gene Set Enrichment Analysis by Broad Institute

    https://qubeshub.org/publications/466/?v=1

12. Using Phyre2

    11 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    How to use Phrye2 and 3DLigandSite to computationally predict protein and active site structure and binding partners (substrates/cofactors/coenzymes).

    https://qubeshub.org/publications/465/?v=1

13. NCBI Overview

    11 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    An overview of some of the databases within NCBI and how to get FASTA sequences.

    https://qubeshub.org/publications/464/?v=1

14. UniProt

    10 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    Brief description of UniProt and its databases and features

    https://qubeshub.org/publications/463/?v=1

15. GSEAtheory

    10 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    Brief introduction to how gene set enrichment analysis works.

    https://qubeshub.org/publications/462/?v=1

16. Simple Heat Maps with Morpheus

    10 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    Learn how to load an Excel file of raw data into Morpheus and change between relative and global scales.

    https://qubeshub.org/publications/461/?v=1

17. What is bioinformatics?

    10 Apr 2018 | Teaching Materials | Contributor(s):

    By Laura Harris

    Davenport University

    Short description of what bioinformatics is, it's potential applications, and what it is not.

    https://qubeshub.org/publications/460/?v=1

18. Development of the NIBLSE Learning Resource Collection and Incubators

    16 Mar 2018 | Teaching Materials | Contributor(s):

    By Bill Morgan¹, Sam S Donovan², Hayley Orndorf², Sabrina Robertson³, Elizabeth Ryder⁴, Michael Sierk⁵, Anne Rosenwald⁶, Liz Dinsdale⁷, Eric Triplett⁸, Mark A. Pauley⁹, William Tapprich¹⁰

    1. The College of Wooster 2. University of Pittsburgh 3. North Carolina State University 4. Worcester Polytechnic Institute 5. Saint Vincent College 6. Georgetown University 7. San Diego State University 8. University of Florida 9. University of Nebraska at Omaha 10. University of Nebraska - Omaha

    Talk on the NIBLSE Resource Collection and Incubators given at several professional development confernces

    https://qubeshub.org/publications/413/?v=1

19. RNAseq data analysis using Galaxy

    13 Nov 2017 | Teaching Materials | Contributor(s):

    By Matthew Escobar¹, Sam S Donovan², Irina Makarevitch³, Bill Morgan⁴, Sabrina Robertson⁵

    1. California State University San Marcos 2. University of Pittsburgh 3. Hamline University 4. The College of Wooster 5. North Carolina State University

    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    https://qubeshub.org/publications/118/?v=3

20. DNA Subway Learning Resources

    18 Oct 2017 | Teaching Materials | Contributor(s):

    By Jason Williams

    DNA Learning Center

    DNA Subway is a NIBLSE Recommended resource. This is a collection of learning resources associated with DNA Subway.

    https://qubeshub.org/publications/164/?v=2