Find information on common questions and issues.
Check on the status of your correspondences with members of the QUBES team.
10 Apr 2018 | Teaching Materials | Contributor(s):
By Laura Harris
Brief introduction to how gene set enrichment analysis works.
Homologous chromosomes? Exploring human sex chromosomes, sex determination and sex reversal using bioinformatics approaches
04 Jan 2019 | Teaching Materials | Contributor(s):
By Kelsey Metzger
University of Minnesota, Rochester
In this four- part guided activity, students will learn about the structure and function of human autosomal and sex chromosomes, view and interpret gene maps, and gain familiarity with basic...
How do we do Bioinformatics?
13 Apr 2018 | Teaching Materials | Contributor(s):
By Barry Grant
University of California - San Diego
A description of the computational setup for “Foundations of Bioinformatics” (BGGN-213) See: http://thegrantlab.org/bggn213/
How to Use BLASTP NCBI
11 Apr 2018 | Teaching Materials | Contributor(s):
A walk through on how to find protein sequences and use BLASTP and PSI-BLAST in NCBI.
Infectious Chocolate Joy with a Side of Poissonian Statistics: An activity connecting life science students with subtle physics concepts
By Eric T. Holland1, Greg Manley1, Tamara Chiba1, Rona Ramos1, Simon Mochrie1, Jennifer Frederick1
Lesson on what it means for biological processes to be Poissonian, published in CourseSource
Interdisciplinary biology education: a holistic approach to an intractable problem
21 May 2019 | Teaching Materials | Contributor(s):
By Kristin Jenkins
Presentation on interdisciplinary biology education at the 2019 Great Lakes Bioinformatics Conference
15 May 2019 | Teaching Materials | Contributor(s):
Java array and random number generator, hints
16 Apr 2018 | Teaching Materials | Contributor(s):
By Hong Qin
Java, UTC, Fall 2017
Java array demo, loop over assignment and print
CPSC1100, UTC, Fall 2017
Java for-loop, investment problem, with debug flag usage demo
BigJava Chapter 6, UTC CPSC1100 Fall 2017. Debug flag usage is shown.
Java String array demo, switch two elements in an array
CPSC1100, UTC Fall 2017
Java String substring usage, initials
CPSC1100 Fall 2017, UTC. Big Java Chapter 4.
Java while loop demo, investment case
BigJava Chapter 6, UTC, CPSC1100 Fall 2017
How to perform Leading Edge Analysis in Gene Set Enrichment Analysis by Broad Institute
Making toast: Using analogies to explore concepts in bioinformatics
By Kate L. Hertweck
University of Texas at Tyler
Module using analogies to introduce students to genomics
Murder by HIV? Undergraduate edition
By Naowarat (Ann) Cheeptham1, Laura B. Regassa2, Michèle I. Shuster3
1. Thompson Rivers University 2. Georgia Southern University 3. New Mexico State University
Bioinformatics case study focusing on phylogenetic tree interpretation, published in the National Center for Case Study Teaching in Science
An overview of some of the databases within NCBI and how to get FASTA sequences.
Needleman - Wunsch Algorithm Exercise
05 Jun 2017 | Teaching Materials | Contributor(s):
By Michael Sierk
Saint Vincent College
This exercise is used in a sophomore-junior level bioinformatics course. The algorithm is introduced to the students who then complete the exercise.
13 Oct 2016 | Teaching Materials | Contributor(s):
By Michael Sierk1, Sam S Donovan2, Neal Grandgenett, Bill Morgan3, Mark A. Pauley4, Elizabeth Ryder5
1. Saint Vincent College 2. University of Pittsburgh 3. The College of Wooster 4. University of Nebraska at Omaha 5. Worcester Polytechnic Institute
03 Aug 2016 | Teaching Materials | Contributor(s):