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Statistics with epidemiology of COVID-19
20 Jun 2021 | Teaching Materials | Contributor(s):
By Maria Shumskaya1, Shakira Benjamin1, Matthew G Niepielko1, Nicholas Lorusso1
Introduction into heat maps, non-parametric t-test and GIF (optional) in R using an original dataset on COVID-19 infections from different counties of New Jersey, USA. Suitable for students who...
Introduction to nucleotide sequence analysis and protein modeling in MEGA and PyMol using coronavirus SARS-CoV-2
18 Jul 2020 | Teaching Materials | Contributor(s):
By Maria Shumskaya1, Nicholas Lorusso2
1. Kean University 2. University of North Texas at Dallas
Introduction into computational approaches in phylogeny and protein modeling based on coronavirus SARS-CoV-2 (caused COVID-19 pandemic). Two self-guided tutorials for standard lab classes of 2.5...
15 Jun 2020 | Teaching Materials | Contributor(s):
By Mallory Bliss1, Alexzandria Khan1, Nandni Verma1, Kasandra Jean-Louise Riley1
This case study leads students through the process of proposing a drug for a novel protein. The Mpro protease of SARS-CoV-2 is explored in detail within the PDB. Aligns with first semester...
03 Apr 2020 | Teaching Materials | Contributor(s):
COVID-19 Simulator (ISEE) Module
20 Mar 2020 | Teaching Materials | Contributor(s):
By Sarah Hews
This accessible module guides students through exploring the COVID-19 Simulator developed by ISEE. Students dig into the four scenarios provided (including the parameters and the graphs), construct...
Coronavirus Epidemic Curves - Graphically Interpreting Derivatives
19 Mar 2020 | Teaching Materials | Contributor(s):
A set of exam questions or class activity related to 'flatten the curve' during the coronavirus outbreak of 2020. Content includes: notation, first derivative, second derivative, and interpreting...
SEIR simulation activity for flattening the curve
12 Mar 2020 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton
Bates College and QUBES
This is a short exploration activity to introduce SIR and SEIR models without explicitly introducing differential equations. It utilizes the R package EpiDynamics and students can run the...