All Categories (1-14 of 14)

1. 2015-European_Bioinformatics_Institute-Bio-Models-Database

   12 Mar 2023 | Teaching Materials | Contributor(s):

   By The European Bioinformatics Institute

   NA

   Bio Models Database is a repository of computational models of biological processes. Models described from literature are manually curated and enriched with cross-references. All models are...

   https://qubeshub.org/publications/3800/?v=1

2. BioNumbers-the database of key numbers in molecular and cell biology

   19 Oct 2018 | Teaching Materials | Contributor(s):

   By Ron Milo¹, Paul Jorgensen², Michael Springer³

   1. Weizmann Institute of Science 2. Harvard Medical School 3. Beth Israel Deaconess Medical Center

   BioNumbers is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of interest to computational, systems and molecular cell biologists

   https://qubeshub.org/publications/821/?v=1

3. BioNumbers—the database of key numbers in molecular and cell biology

   out of 5 stars 

   03 Oct 2015 | | Contributor(s):: Ron Milo, Paul Jorgensen, Uri Moran, Griffin Weber, Michael Springer

   This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/821BioNumbers (http://www.bionumbers.hms.harvard.edu) is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of...

4. BIRDD: Galapagos Data Found in Data Dryad

   02 Mar 2017 | Datasets | Contributor(s):

   By Dylan Chase McHugh, Sam S Donovan¹, Sarah Scott

   University of Pittsburgh

   BIRDD: Galapagos Data Found in Data Dryad

   https://qubeshub.org/publications/61/?v=1

5. CourseSource Bioinformatics Teaching Materials

   03 Aug 2016 | Datasets | Contributor(s):

   By Hayley Orndorf

   University of Pittsburgh

   CourseSource Teaching Materials tagged "Bioinformatics"

   https://qubeshub.org/publications/20/?v=1

6. Databases

   Dr. Who Component When installing the Dr. Who component in the app/components directory, it is unclear how to initialize the database with records. There is a file in the root directory called...

   https://qubeshub.org/community/projects/qubeswebdev/notes/Databases

7. Dryad Digital Repository

   Collections | 13 Oct 2016 | Posted by Drew LaMar

   https://qubeshub.org/community/groups/introquantbio/collections/data-repositories

8. 

   Fritz José Pichardo

   https://qubeshub.org/community/members/21042

9. GBIF Tutorial - BLUE Resource

   19 Mar 2020 | Teaching Materials | Contributor(s):

   By Libby Ellwood

   iDigBio

   A user guide and video instructions for GBIF

   https://qubeshub.org/publications/1770/?v=1

10. GEA Introductory lesson on BLAST

    25 Jul 2020 | Teaching Materials | Contributor(s):

    By Justin DiAngelo¹, Alexis Nagengast², Wilson Leung³, Douglas L Chalker³

    1. Penn State Berks 2. Widener University 3. Washington University in St. Louis

    The "Introduction to BLAST using Human Leptin" exercise aims to introduce students to the use of the Basic Local Alignment Search Tool (BLAST) to identify related sequences and compare similarity...

    https://qubeshub.org/publications/1987/?v=1

11. Long Term Ecological Research (LTER) Network

    Collections | 13 Oct 2016 | Posted by Drew LaMar

    https://qubeshub.org/community/groups/introquantbio/collections/data-repositories

12. NIBLSE Learning Resource Collection

    15 Jan 2019 | Teaching Materials | Contributor(s):

    By Hayley Orndorf¹, Sam S Donovan¹

    University of Pittsburgh

    NIBLSE Learning Resource Collection

    https://qubeshub.org/publications/57/?v=1

13. Observing the Birds of El Paso: Revisiting historical localities online and in the field

    24 Feb 2024 | Teaching Materials | Contributor(s):

    By Julie Marie Schlichte¹, Vicky Zhuang, Phillip Lavretsky²

    1. The University of Texas at El Paso 2. University of Texas at El Paso

    In this set of activities, students are introduced to several features and use cases of museum databases to understand the importance of historical natural history specimens and their data. Using...

    https://qubeshub.org/publications/4657/?v=1

14. Public DB of SI 2016 Working Groups

    18 Jul 2016 | Datasets | Contributor(s):

    By Hayley Orndorf

    University of Pittsburgh

    Working groups of SI 2016

    https://qubeshub.org/publications/19/?v=1

15. Quandl

    Collections | 13 Oct 2016 | Posted by Drew LaMar

    https://qubeshub.org/community/groups/introquantbio/collections/data-repositories

16. Summer Workshop Sessions

    14 Jul 2017 | Datasets | Contributor(s):

    By Hayley Orndorf

    University of Pittsburgh

    Summer workshop sessions

    https://qubeshub.org/publications/90/?v=1

17. 

    Tony Sena

    - M.S., COMPUTER SCIENCE (Distributed and Parallel Computing), from Northeastern University, Boston, MA- M.S., EARTH SCIENCE (Parallel Computing applied to Geophysics), from Massachusetts Institute...

    https://qubeshub.org/community/members/1506

18. Using the IEDB to Predict Proteasomal Cleavage Events and T-cell Epitopes

    17 Dec 2022 | Teaching Materials | Contributor(s):

    By Miko Mallari¹, Sheela Vemu², Valerie Carson³, Golnar Afshar⁴, Alma Rodriguez Estrada⁵, Clifford Wilson⁶, Sandra Porter⁷

    1. City College of San Francisco 2. Waubonsee Community College 3. Hillsborough Community College 4. Skyline College 5. Aurora University 6. City Colleges of Chicago 7. Digital World Biology

    Research experiences provide a valuable view into the world of science and a great way to explore new fields and careers while developing critical thinking skills. The development and maintenance...

    https://qubeshub.org/publications/3595/?v=1

19. Working Groups from Summer Institute 2016

    18 Jul 2016 | Datasets | Contributor(s):

    By Hayley Orndorf

    University of Pittsburgh

    Information about the SI 2016 working groups including links to member action plans and group homepages.

    https://qubeshub.org/publications/18/?v=1