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Tags: Faculty

All Categories (1-20 of 45)

  1. Team microBIOME Fall 2020 - DIY microbiome analysis

    25 Nov 2020 | Teaching Materials | Contributor(s):

    By Davida Smyth1, Alice Tarun2, Christine Girtain3, Melanie Lenahan4, Maira Goytia, Khuanchivin Geena Sompanya5, Theodore Muth6

    1. The New School 2. Alfred State College 3. Toms River Regional School NJ 4. Raritan Valley Community College 5. CUNY 6. CUNY Brooklyn College

    This is our final team report for this year's BIOME Institute 2020. Learn about what we got up to and what we're planning for Spring 2021. If you want more information on REMNet go...

    https://qubeshub.org/publications/2148/?v=1

  2. Genomics Lessons with GEA - RNA-Seq CURES

    25 Nov 2020 | Teaching Materials | Contributor(s):

    By Vince Buonaccorsi1, Marcella Denise Cervantes2, Douglas L Chalker3, Maira Goytia, Wilson Leung3, Laurel Lorenz4, Laura Reed, Anne Rosenwald5, Analyne Manzano Schroeder6, Emily Wiley7, Jason Williams8

    1. Juniata College 2. Albion College 3. Washington University in St. Louis 4. Princeton 5. Georgetown University 6. Sanford Burnham Prebys Medical Discovery Institute 7. Claremont McKenna College 8. Cold Spring Harbor Laboratory

    Our BIOME Group worked towards developing a set of learning goals for faculty who plan to launch a CURE based on RNA-Seq data. We also developed a workflow for analysis of either prokaryotic or...

    https://qubeshub.org/publications/2147/?v=1

  3. Analysis of Amylase Activity

    24 Nov 2020 | Teaching Materials | Contributor(s):

    By Allison Carter Burlyn1, Christina Fieber1, Melanie Lenahan2

    1. Horry-Georgetown Technical College 2. Raritan Valley Community College

    This lab is an exploration of enzyme function and the effects of environmental conditions on the activity of the enzyme amylase. The lab utilizes analytical and graphing skills to assess enzyme...

    https://qubeshub.org/publications/2145/?v=1

  4. Examining the Physiology Behind the Symptoms of Lactose Intolerance

    28 Aug 2020 | Teaching Materials | Contributor(s):

    By Melissa Haswell

    Davenport University

    This is a set of extension questions for the HHMI short film The Making of the Fittest: Got Lactase? The Co-evolution of Genes Video Activity.

    https://qubeshub.org/publications/2087/?v=1

  5. S-JEDI Learning Group Resource

    27 Aug 2020 | Teaching Materials | Contributor(s):

    By Carrie Diaz Eaton1, Jasmine Roberts2, Pat Marsteller3, Maggie Diamond-Stanic4

    1. Bates College and QUBES 2. The Ohio State University 3. Emory University 4. Bates College

    This resource provides a curriculum for a 6 week learning group centered on examining social justice, equity, diversity, and inclusion, specifically geared to organizational leaders in open education.

    https://qubeshub.org/publications/2079/?v=1

  6. Lesson VII - Synteny

    05 Aug 2020 | Teaching Materials | Contributor(s):

    By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3

    1. Gallaudet University 2. Georgetown University 3. Cabrini University

    The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.

    https://qubeshub.org/publications/1414/?v=3

  7. Phage Discovery Videos

    05 Aug 2020 | Teaching Materials | Contributor(s):

    By Billy Biederman, Vic Sivanathan1

    Howard Hughes Medical Institute

    A compilation of videos to support teaching the concepts and protocols for discovering and working with phage.

    https://qubeshub.org/publications/2034/?v=1

  8. Atlas of Black Scholarship for Inclusive and Racially Diverse STEM Curricula – Volume I

    30 Jul 2020 | Teaching Materials | Contributor(s):

    By Aparna Anandkumar1, Ariel Moline2, Pascale S. Guiton2

    1. Castro Valley High School & California State University East Bay 2. California State University East Bay

    The contributions of Black scientists to the advancement of STEM are poorly represented in course materials. Here, we provide an Atlas of Black Scholarship to help Life Sciences and Chemistry...

    https://qubeshub.org/publications/2022/?v=1

  9. Vertebrate Clade Race

    11 Jun 2020 | Teaching Materials | Contributor(s):

    By David Baum1, Kristin Jenkins2

    1. University of Wisconsin 2. BioQUEST

    This activity introduces basic tree reading skills for evolutionary phylogenies. It is designed as a short group activity. After completing this activity, students should be familiar with basic...

    https://qubeshub.org/publications/1906/?v=1

  10. Digital Atlas of Ancient Life | Exploring the Diversity and History of Fossil Life

    08 Jun 2020 | Teaching Materials | Contributor(s):

    By Jonathan Hendricks

    Paleontological Research Institution

    The Digital Atlas project include field guides to fossils (including a mobile app), an online paleontology textbook, and a collection of over 500 virtual 3D models of fossil specimens.

    https://qubeshub.org/publications/1893/?v=1

  11. Caribbean coral reef structure and biodiversity - Comparing boosted regression tree & multiple regression approaches

    29 May 2020 | Teaching Materials | Contributor(s):

    By Eric Womack

    Virginia Commonwealth University

    Creating and comparing boosted regression tree models to multiple regression models.

    https://qubeshub.org/publications/1870/?v=1

  12. Using Digitized Collections-Based Data in Research: A Hands-On Crash Course in Ecological Niche Modeling

    23 Apr 2020 | Teaching Materials | Contributor(s):

    By Blaine Marchant

    Stanford University

    Step-by-step, hands-on instruction on ways to access and download these specimen data, how to process climate layer data, and how to apply Maxent software to construct ecological niche models.

    https://qubeshub.org/publications/1819/?v=1

  13. Coding Club: A Positive Peer-Learning Community

    22 Apr 2020 | Teaching Materials | Contributor(s):

    By Gergana Daskalova1, Sandra Angers-Blondin1, John Godlee1, Izzy Rich1, Beverly Tan1, Declan Valters1, Haydn Thomas1, Pedro Miranda1, Gabriela Hajduk1, Kat Keogan1, Isla Myers-Smith1, Kyle Dexter1, Christina Coakley1

    University of Edinburgh

    Free and self-paced tutorials and courses for learning to code out of the University of Edinburgh

    https://qubeshub.org/publications/1816/?v=1

  14. GBIF Tutorial - BLUE Resource

    19 Mar 2020 | Teaching Materials | Contributor(s):

    By Libby Ellwood

    iDigBio

    A user guide and video instructions for GBIF

    https://qubeshub.org/publications/1770/?v=1

  15. iDigBio Tutorial - BLUE Resource

    19 Mar 2020 | Teaching Materials | Contributor(s):

    By Molly Phillips

    iDigBio, Florida Museum of Natural History, University of Florida

    A user guide and video instructions for iDigBio

    https://qubeshub.org/publications/1771/?v=1

  16. Arctos Tutorial - BLUE Resource

    19 Mar 2020 | Teaching Materials | Contributor(s):

    By Erica Krimmel

    iDigBio, Florida State University

    A user guide and video instructions for Arctos

    https://qubeshub.org/publications/1768/?v=1

  17. Online, 10-minute adaptation of Biobyte 1 – Where are we in the data science landscape?

    10 Dec 2019 | Teaching Materials | Contributor(s):

    By Megan A. Jones

    National Ecological Observatory Network

    Adaptation for 10 minute activity in an online meeting to introduce the NAS Data Science For Undergraduates report's definition of data acumen and engage participants in a self assessment of how...

    https://qubeshub.org/publications/1508/?v=1

  18. Earth Analytics in Python Course

    01 Nov 2019 | Teaching Materials | Contributor(s):

    By Leah Wasser1, Jenny Palomino1, Chris Holdgraf2

    1. Earth Lab - University of Colorado, Boulder 2. University of California, Berkeley

    Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...

    https://qubeshub.org/publications/1437/?v=1

  19. Lesson VII - Synteny

    22 Oct 2019 | Teaching Materials | Contributor(s):

    By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3

    1. Gallaudet University 2. Georgetown University 3. Cabrini University

    The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.

    https://qubeshub.org/publications/1414/?v=2

  20. OER Toolkit - Created by Ontario Colleges (OCLC)

    Collections | 18 Oct 2019 | Posted by Lisa Petrides

    https://qubeshub.org/community/groups/score/collections/links-related-to-oer-and-score-summit