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Earth Analytics in Python Course
09 Oct 2019 | Teaching Materials | Contributor(s):
By Leah Wasser, Jenny Palomino, Chris Holdgraf1
University of California - Berkeley
Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Writing Clean Code in R Workshop
By Max Joseph1, Leah Wasser
Earth Lab - University of Colorado, Boulder
When working with data, you often spend the most amount of time cleaning your data. Learn how to write more efficient code using the tidyverse in R.
Introduction to Version Control and Git Workshop
By Leah Wasser, Max Joseph
Learn how to use version control with Git to work collaboratively and back up your work.
Get Started With GIS in Open Source Python Workshop
By Leah Wasser1, Jenny Palomino1, Joe McGlinchy1
There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...
Earth Analytics Bootcamp Course
By Jenny Palomino1, Leah Wasser
The Earth Analytics Bootcamp is a three-week introductory-level course taught by instructors in Earth Lab and is a part of the Professional Certificate in Earth Data Analytics - Foundations at CU...
Earth Analytics in R Course
By Leah Wasser
Earth analytics is an advanced, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Lesson VII - Synteny
08 Sep 2019 | Teaching Materials | Contributor(s):
By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
28 Aug 2019 | Teaching Materials | Contributor(s):
By Jessica Joyner
CUNY Brooklyn College
Video on normalizing microbiome data from the Research Experiences in Microbiomes Network
Biobyte 4 - The role of data science principles and practices in undergraduate biology
15 Aug 2019 | Teaching Materials | Contributor(s):
By Sam S Donovan
University of Pittsburgh
This short activity was an effort to launch a community conversation around the interface of data science principles and practices and undergraduate biology education. A variety of resources,...
Summer 2019 Biobytes
14 Aug 2019 | Teaching Materials | Contributor(s):
This series includes the four Biobytes that were piloted at the 2019 BioQUEST / QUBES Summer Workshop titled, “Evolution of Data in the Classroom: From Data to Data Science”.
Biobyte 3 - Lab reports as reproducible research
By Sam S Donovan1, Drew LaMar2
1. University of Pittsburgh 2. College of William and Mary
This short activity introduces a discussion of reproducibility in scientific research and ways that we might address these ideas with undergraduates. There is an opportunity to use a prototype...
Biobyte 2 - Exploratory data analysis
This short activity can be used to introduce the concept of exploratory data analysis and get participants to think about how this data science strategy is complementary to having students...
NEON Data in the Classroom: Using the QUBES Platform and Faculty Mentoring Networks to Build, Adapt, and Publish Data-Driven Teaching Resources
13 Aug 2019 | Teaching Materials | Contributor(s):
By Kusum Naithani1, Megan A. Jones2, Kristine Grayson3
1. University of Arkansas 2. National Ecological Observatory Network 3. University of Richmond
The NEON FMN has been offered for three semesters with 37 faculty participating, resulted in a wide variety of new and adapted modules being publicly available.
DEHPD 17 Steps in the Hiring Process
08 Aug 2019 | Teaching Materials | Contributor(s):
By Equity & Diversity in Hiring Process Committee
Higher Education Institutions in Puget Sound
A 17 step document created by people from marginalized populations for equity and diversity in hiring.
Biobyte 1 - Where are we in the data science landscape?
06 Aug 2019 | Teaching Materials | Contributor(s):
This short activity can be used to introduce the NAS Data Science For Undergraduates report's definition of data acumen and engage participants in a self assessment of how they connect with those...
Faculty Mentoring Networks for Botany Faculty Professional Development
23 Jul 2019 | Teaching Materials | Contributor(s):
By J. Phil Gibson
University of Oklahoma
Poster presented at the 2019 Botanical Society of America conference.
03 Jun 2019 | Teaching Materials | Contributor(s):
By Lisa Dierker
E-book in .pdf format and customizable .iba format
Mentoring Pacific Island Students for Conservation
07 Apr 2019 | Teaching Materials | Contributor(s):
By Noelani Puniwai-Ganoot1, Sharon Ziegler-Chong2, Rebecca Ostertag3, Moana Ulu Ching4, Linnea Heu2, Cherie Kauahi2
1. University of Hawaii at Manoa 2. University of Hawaii at Hilo 3. University of Hawaii At Hilo 4. Conservation International
This undergraduate internship program focuses on mentoring Pacific Island Students into conservation careers through development of skills, networks and sense of self, while being grounded in...
Working with spreadsheet-style data in Python with pandas and seaborn
20 Dec 2018 | Teaching Materials | Contributor(s):
By Madeleine Bonsma-Fisher
University of Toronto
This 4-hour participatory live-coding workshop takes learners through the basics of programming in Python via the Jupyter Lab interface and culminates with exploration and visualization of...
Introduction to Python for Data Science Course
05 Nov 2018 | Teaching Materials
Free Introduction to Python for Data Science Course at DataCamp