You are here: Home / Tags / gene expression / Resources

Tags: gene expression

More tags

Resources (1-20 of 27)

  1. 1999-T_Chen-HL_He-GM_Church-S_Shafer-Modeling Gene Expression with Differential Equations

    26 Mar 2023 | Teaching Materials | Contributor(s):

    By Ting Chen

    NA

    The paper proposes and give great detail for a differential equation model for gene expression with two methods for constructing the model from a set of temporal data.

    https://qubeshub.org/publications/3884/?v=1

  2. A CRISPR/Cas Guide RNA Design In Silico Activity

    29 Aug 2021 | Teaching Materials | Contributor(s):

    By Leigh Ann Samsa*1, Linnea Andersen1, Adam Groth1, Carlos Goller1

    North Carolina State University

    CRISPR biotechnologies inspired by the Clustered Regularly Interspaced Short Palindromic Repeat RNA-guided nuclease adaptive bacterial immune system have revolutionized biology research and become...

    https://qubeshub.org/publications/2701/?v=1

  3. A Laboratory Module That Explores RNA Interference and Codon Optimization Through Fluorescence Microscopy Using Caenorhabditis elegans

    11 Jul 2022 | Teaching Materials | Contributor(s):

    By Nicholas J. Palmisano1, Maryam A. Azmi1, Taylor N. Medwig-Kinney1, Frances E. Q. Moore1, Rumana Rahman1, Wan Zhang1, Rebecca C. Adikes1, David Q. Matus*1

    Stony Brook University

    Scientific research experiences are beneficial to students allowing them to gain laboratory and problem-solving skills, as well as foundational research skills in a team-based setting. We designed...

    https://qubeshub.org/publications/2949/?v=1

  4. A Short Laboratory Module to Help Infuse Metacognition during an Introductory Course-based Research Experience

    28 Aug 2021 | Teaching Materials | Contributor(s):

    By Suzanne R. Lee*1, Caroline (Lina) L. Dahlberg1, Benjamin L. Wiggins2

    1. Western Washington University 2. University of Washington

    A core competency identified in Vision and Change for undergraduate biology students is the Ability to Apply the Process of Science. Here, we describe a three-week laboratory module for students in...

    https://qubeshub.org/publications/2636/?v=1

  5. Cell Signaling Pathways - a Case Study Approach

    26 Aug 2021 | Teaching Materials | Contributor(s):

    By Lesley Emtage1, Louis Bradbury1, Natalia Coleman2, Danelle Devenport3, Amanda Nietzel4, John Grew2

    1. York College, CUNY 2. New Jersey City University 3. Princeton University 4. Macmillan Learning

    Signaling and gene expression are fundamental to cell biology and developmental biology. Although these topics are highly interrelated, they typically appear in separate units in a course. We use a...

    https://qubeshub.org/publications/2573/?v=1

  6. Differential Gene Expression during Xenopus laevis Development

    29 Aug 2021 | Teaching Materials | Contributor(s):

    By Emily T. Shifley*

    Northern Kentucky University

    In Developmental Biology classes, students are challenged with understanding how differential gene expression guides embryonic development. It can be difficult for students to realize that genes...

    https://qubeshub.org/publications/2649/?v=1

  7. Garden Variety Mutations: Using Primary Data to Understand the Central Dogma in Large-Lecture Introductory Biology

    22 Nov 2022 | Teaching Materials | Contributor(s):

    By Jacob Woodbury†1, Jessie B. Arneson†2, Jacey Anderson1, Larry Collins3, Andy Cavagnetto1, William Davis1, Erika G. Offerdahl*1

    1. Washington State University 2. University of Jamestown 3. Delta State University

    The ability to interpret and create an argument from data is a crucial skill for budding scientists, yet one that is seldom practiced in introductory courses. During this argumentation module,...

    https://qubeshub.org/publications/3559/?v=1

  8. Investigating Gene Expression and Cell Specialization in Axolotl Embryos

    29 Aug 2021 | Teaching Materials | Contributor(s):

    By Deborah Eastman*

    Connecticut College

    The process of cell specialization is critical to the formation and function of tissues in animals and plants. Although gene expression, including the regulation of transcription, is taught in most...

    https://qubeshub.org/publications/2671/?v=1

  9. Population Demography in Swirl

    12 Feb 2020 | Teaching Materials | Contributor(s):

    By Emily Weigel

    Georgia Institute of Technology

    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    https://qubeshub.org/publications/1214/?v=4

  10. Population Demography in Swirl

    06 Nov 2019 | Teaching Materials | Contributor(s):

    By Emily Weigel

    Georgia Institute of Technology

    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    https://qubeshub.org/publications/1214/?v=3

  11. Population Demography in Swirl

    26 Sep 2019 | Teaching Materials | Contributor(s):

    By Emily Weigel

    Georgia Institute of Technology

    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    https://qubeshub.org/publications/1214/?v=2

  12. Population Demography in Swirl

    15 May 2019 | Teaching Materials | Contributor(s):

    By Emily Weigel

    Georgia Institute of Technology

    The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.

    https://qubeshub.org/publications/1214/?v=1

  13. Regulación de expresión génica y adipogénesis por PPAR-γ

    09 Jul 2019 | Teaching Materials | Contributor(s):

    By Juan Sebastián Ramírez-Lugo

    University of Puerto Rico-Río Piedras

    En ésta actividad de dibujo / coloreado los estudiantes aprenderán sobre los diferentes componentes involucrados en la regulación de la activación de PPAR-γ, un factor de transcripción que juega un...

    https://qubeshub.org/publications/1343/?v=1

  14. Regulation of Gene Expression and Adipogenesis by PPAR-γ

    07 Jan 2019 | Teaching Materials | Contributor(s):

    By Gary Laverty1, Thomas John Peters2, Juan Sebastián Ramírez-Lugo3, Denise Levin Signorelli4, Saumya Ramanathan

    1. University of Delaware 2. University of Pittsburgh 3. University of Puerto Rico-Río Piedras 4. College of Southern Nevada

    Students learn about transcriptional regulation of PPAR-γ, an important controller of adipose tissue stores and energy metabolism through a drawing/coloring activity of the different components...

    https://qubeshub.org/publications/1010/?v=1

  15. RNAseq data analysis using Galaxy

    02 Jul 2021 | Teaching Materials | Contributor(s):

    By Matthew Escobar1, Sam S Donovan2, Irina Makarevitch3, Bill Morgan4, Sabrina Robertson5

    1. California State University San Marcos 2. University of Pittsburgh 3. Hamline University 4. The College of Wooster 5. North Carolina State University

    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    https://qubeshub.org/publications/118/?v=4

  16. RNAseq data analysis using Galaxy

    13 Nov 2017 | Teaching Materials | Contributor(s):

    By Matthew Escobar1, Sam S Donovan2, Irina Makarevitch3, Bill Morgan4, Sabrina Robertson5

    1. California State University San Marcos 2. University of Pittsburgh 3. Hamline University 4. The College of Wooster 5. North Carolina State University

    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    https://qubeshub.org/publications/118/?v=3

  17. RNAseq data analysis using Galaxy

    01 Aug 2017 | Teaching Materials | Contributor(s):

    By Matthew Escobar

    California State University - San Marcos

    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    https://qubeshub.org/publications/118/?v=2

  18. RNAseq data analysis using Galaxy

    03 Jul 2017 | Teaching Materials | Contributor(s):

    By Matthew Escobar

    California State University - San Marcos

    This is a bioinformatics exercise intended for use in a computer lab setting with life science majors.

    https://qubeshub.org/publications/118/?v=1

  19. Splicing it Together: Using Primary Data to Explore RNA Splicing and Gene Expression in Large-Lecture Introductory Biology

    28 Apr 2022 | Teaching Materials | Contributor(s):

    By Jessie B. Arneson1, Jacob Woodbury1, Jacey Anderson1, Larry B. Collins2, Andy Cavagnetto1, William B. Davis1, Erika G. Offerdahl*1

    1. Washington State University 2. Washington State University, Delta State University

    At the heart of scientific ways of knowing is the systematic collection and analysis of data, which is then used to propose an explanation of how the world works. In this two-day module, students...

    https://qubeshub.org/publications/2863/?v=1

  20. Tackling "Big Data" with Biology Undergrads: A Simple RNA-seq Data Analysis Tutorial Using Galaxy

    28 Aug 2021 | Teaching Materials | Contributor(s):

    By Matthew Anthony Escobar*1, William Morgan2, Irina Makarevitch3, Sabrina Robertson4

    1. California State University San Marcos 2. The College of Wooster 3. Hamline University 4. North Carolina State University

    Analyzing high-throughput DNA sequence data is a fundamental skill in modern biology. However, real and perceived barriers such as massive file sizes, substantial computational requirements, and...

    https://qubeshub.org/publications/2626/?v=1

Close

Home

Search