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Data management and introduction to QGIS and RStudio for spatial analysis
22 May 2020 | Datasets | Contributor(s):
By Meghan Graham MacLean
University of Massachusetts Amherst
Students learn about the importance of good data management and begin to explore QGIS and RStudio for spatial analysis purposes. Students will explore National Land Cover Database raster data and...
Using Digitized Collections-Based Data in Research: A Hands-On Crash Course in Ecological Niche Modeling
23 Apr 2020 | Teaching Materials | Contributor(s):
By Blaine Marchant
Step-by-step, hands-on instruction on ways to access and download these specimen data, how to process climate layer data, and how to apply Maxent software to construct ecological niche models.
Coding Club: A Positive Peer-Learning Community
22 Apr 2020 | Teaching Materials | Contributor(s):
By Gergana Daskalova1, Sandra Angers-Blondin1, John Godlee1, Izzy Rich1, Beverly Tan1, Declan Valters1, Haydn Thomas1, Pedro Miranda1, Gabriela Hajduk1, Kat Keogan1, Isla Myers-Smith1, Kyle Dexter1, Christina Coakley1
University of Edinburgh
Free and self-paced tutorials and courses for learning to code out of the University of Edinburgh
Searching for disability as biodiversity in digitized natural history collections
27 Mar 2020 | Teaching Materials | Contributor(s):
By Kaitlin Stack Whitney
Rochester Institute of Technology
This module uses digitized natural history and biodiversity collections to explore if, how, and whether disability can be studied in nonhumans as a form of biodiversity.
21st Century STEM Workforce Skills
22 Mar 2020 | Teaching Materials | Contributor(s):
By Anna Monfils1, Debra Linton1
Central Michigan University
This activity includes a leadership assessment and associated exercise to encourage the development of 21st Century STEM Skills.
GBIF Tutorial - BLUE Resource
19 Mar 2020 | Teaching Materials | Contributor(s):
By Libby Ellwood
A user guide and video instructions for GBIF
iDigBio Tutorial - BLUE Resource
By Molly Phillips
iDigBio, Florida Museum of Natural History, University of Florida
A user guide and video instructions for iDigBio
Arctos Tutorial - BLUE Resource
By Erica Krimmel
A user guide and video instructions for Arctos
Does Organelle Shape Matter? Exploring Cell Shape through the Allen Cell Explorer and High-content Microscopy Datasets
13 Mar 2020 | Teaching Materials | Contributor(s):
By Carlos Christopher Goller1, Kaitlyn Casimo
North Carolina State University
The morphology and localization of structures inside the cell are often assumed to fit the ideal images found in biology textbooks. This interrupted case study using high-throughput microscopy data...
Testing hypotheses about the role of wildfire in structuring avian communities
19 Dec 2019 | Teaching Materials | Contributor(s):
By Lesley Bulluck
Virginia Commonwealth University, Center for Environmental Studies
This module assesses the role of wildfire in the eastern US and its impact on bird communities using NEON bird survey data from pre- and post- a major wildfire in the Great Smoky Mountains National...
Biodiversity research using digitized, internet-based natural history collections
17 Dec 2019 | Teaching Materials | Contributor(s):
Collections based research is a critical tool for organismal biology and biodiversity research. Yet natural history collections have a complicated past. This multi-class module examines the...
Earth Analytics in Python Course
01 Nov 2019 | Teaching Materials | Contributor(s):
By Leah Wasser1, Jenny Palomino1, Chris Holdgraf2
1. Earth Lab - University of Colorado, Boulder 2. University of California, Berkeley
Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Get Started With GIS in Open Source Python Workshop
15 Oct 2019 | Teaching Materials | Contributor(s):
By Leah Wasser1, Jenny Palomino1, Joe McGlinchy1
Earth Lab - University of Colorado, Boulder
There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...
Introduction to Version Control and Git Workshop
By Leah Wasser, Max Joseph
Learn how to use version control with Git to work collaboratively and back up your work.
Writing Clean Code in R Workshop
By Max Joseph1, Leah Wasser
When working with data, you often spend the most amount of time cleaning your data. Learn how to write more efficient code using the tidyverse in R.
Introduction to Earth Data Science Textbook
By Jenny Palomino, Leah Wasser
Introduction to Earth Data Science is an online textbook for anyone new to open reproducible science and the Python programming language. There are no prerequisites for this material, and no prior...
Earth Analytics in R Course
By Leah Wasser
Earth analytics is an advanced, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Earth Analytics Bootcamp Course
By Jenny Palomino1, Leah Wasser
The Earth Analytics Bootcamp is a three-week introductory-level course taught by instructors in Earth Lab and is a part of the Professional Certificate in Earth Data Analytics - Foundations at CU...
REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
28 Aug 2019 | Teaching Materials | Contributor(s):
By Jessica Joyner
CUNY Brooklyn College
Video on normalizing microbiome data from the Research Experiences in Microbiomes Network
12 Jun 2019 | Teaching Materials | Contributor(s):