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Tags: Graduate

All Categories (1-20 of 56)

  1. Phage Comparative Genomics Lab Manual

    30 Aug 2021 | Teaching Materials | Contributor(s):

    By Andrew Kapinos1, Canela Torres2, Amanda Freise2

    1. University of California, San Diego 2. University of California, Los Angeles

    A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...

    https://qubeshub.org/publications/2745/?v=1

  2. Climate change and Strawberries: A real-life problem-based activity for teaching ANOVA

    08 Aug 2021 | Teaching Materials | Contributor(s):

    By Nicole Hopkins1, Holly Felker1, Catharine Dickerson1, Terry O'Brien1, Dex Whittinghill1, Nathan Ruhl1

    Rowan University

    This is a real-life lab activity for teaching ANOVA using Problem-Based Learning and formatted for one-day (JMP or R) or two-day (JMP) implementations.

    https://qubeshub.org/publications/2503/?v=1

  3. Comparative Landscape Ecology Project using RStudio Cloud (Project EDDIE)

    17 May 2021 | Teaching Materials | Contributor(s):

    By Elizabeth Ferguson

    This modified version incorporates the use of RStudio Cloud for easier remote instruction, and culminates in an exploratory project comparing the influence of patch metrics on vegetation health for...

    https://qubeshub.org/publications/2378/?v=1

  4. Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project

    14 May 2021 | Teaching Materials | Contributor(s):

    By Jane Dell

    Western Carolina University

    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    https://qubeshub.org/publications/2368/?v=1

  5. Lichens in Your Local Landscape

    12 May 2021 | Teaching Materials | Contributor(s):

    By Leah Dudley

    East Central University

    This project uses Lichens to connect students with their local environmental air quality. Through a short lab session, students assess lichens growing on trees on their campus. They then use class...

    https://qubeshub.org/publications/2352/?v=1

  6. Designing an Anti-Racist Syllabus

    08 Mar 2021 | Teaching Materials | Contributor(s):

    By CSUEB Alliance for the Black Community Education1, Ana Almeida1, Kim Geron1, Pascale S. Guiton1, Nina Haft1, Marlin Halim1, Eve Higby1, Michael Lee1, ZáNean McClain1

    California State University East Bay

    The Alliance for the Black Community (ABC) developed a workshop to help faculty at California State University East Bay redesign their syllabi to incorporate anti-racist pedagogical practices.

    https://qubeshub.org/publications/2284/?v=1

  7. What is Data Science - Introduction to Data Science

    04 Dec 2020 | Teaching Materials | Contributor(s):

    By Neelesh Sharma

    Intellipaat

    Data Science is the technology that goes behind handling and working with data in the 21st century. Data Science concepts have proved to be the pinnacle in the last couple of years with the onset...

    https://qubeshub.org/publications/2169/?v=1

  8. Case Study — World records as measures of senescence or randomness

    12 Nov 2020 | Teaching Materials | Contributor(s):

    By Carrie Diaz Eaton1, Carl Bergstrom2, Jevin West2

    1. Bates College and QUBES 2. University of Washington

    This is a project meant to accompany the Case Study that Carl Bergstrom, which uses R to explore whether declining track and field world record performance could be an artifact of sample size (less...

    https://qubeshub.org/publications/2125/?v=1

  9. Case Study - Storks vs Babies

    11 Nov 2020 | Teaching Materials | Contributor(s):

    By Carrie Diaz Eaton

    Bates College and QUBES

    This is a R project based on the Robert Matthews paper Storks vs Babies. The idea is to replicate the results of the paper, learn a bit about R for linear fits and graphing and explore correlation...

    https://qubeshub.org/publications/2123/?v=1

  10. Why, when, and how to cite sources of biodiversity specimen data

    07 Nov 2020 | Teaching Materials | Contributor(s):

    By Katie Pearson

    Cal Poly State University

    This short video and assessment explain why we as scientists should cite our data sources and how we can do this for sources of biodiversity specimen data.

    https://qubeshub.org/publications/2119/?v=1

  11. Lichens in Diverse Landscapes: EREN-NEON Flexible Learning Project

    18 Aug 2020 | Teaching Materials | Contributor(s):

    By Danielle Garneau1, Matthew Joshua Heard2, Mary Beth Kolozsvary3

    1. SUNY Plattsburgh 2. Winthrop University 3. Siena College

    This project makes use of publicly-available datasets on lichen presence and abundance and wet deposition, paired with geospatial data on air quality, tree canopy cover, and locally collected field...

    https://qubeshub.org/publications/2066/?v=1

  12. Backyard Beetles + Pollinators: EREN-NEON Flexible Learning Project

    18 Aug 2020 | Teaching Materials | Contributor(s):

    By Kaitlin Stack Whitney

    Rochester Institute of Technology

    Students observe insect pollinators and other floral visitors in their backyards, or campus, or nearby natural areas to describe plant-pollinator networks and assess how the assemblages from their...

    https://qubeshub.org/publications/2063/?v=1

  13. Atlas of Black Scholarship for Inclusive and Racially Diverse STEM Curricula – Volume I

    30 Jul 2020 | Teaching Materials | Contributor(s):

    By Aparna Anandkumar1, Ariel Moline2, Pascale S. Guiton2

    1. Castro Valley High School & California State University East Bay 2. California State University East Bay

    The contributions of Black scientists to the advancement of STEM are poorly represented in course materials. Here, we provide an Atlas of Black Scholarship to help Life Sciences and Chemistry...

    https://qubeshub.org/publications/2022/?v=1

  14. NEON Data in the Classroom: Quantifying Spatial Patterns

    23 Jul 2020 | Teaching Materials | Contributor(s):

    By Kusum Naithani

    University of Arkansas, Fayetteville, AR 72701

    Students build on fundamental concepts of spatial patterns and combine this knowledge with the open-data from the National Ecological Observatory Network to quantify spatial autocorrelation and...

    https://qubeshub.org/publications/1398/?v=1

  15. Understanding COVID-19 Biology to Design a Vaccine - Ethics supplement

    08 Jul 2020 | Teaching Materials | Contributor(s):

    By Keith A. Johnson

    Bradley University College of Liberal Arts and Sciences

    The adaptation to Understanding COVID-19 Biology to Design a Vaccine entails two ethics supplements. The first supplement addresses the use of off-label drugs in the pandemic (or other situation)....

    https://qubeshub.org/publications/1955/?v=1

  16. Vertebrate Clade Race

    11 Jun 2020 | Teaching Materials | Contributor(s):

    By David Baum1, Kristin Jenkins2

    1. University of Wisconsin 2. BioQUEST

    This activity introduces basic tree reading skills for evolutionary phylogenies. It is designed as a short group activity. After completing this activity, students should be familiar with basic...

    https://qubeshub.org/publications/1906/?v=1

  17. Remote sensing data processing – NEON airborne data

    10 Jun 2020 | Teaching Materials | Contributor(s):

    By Yingying Xie

    Northwestern University

    Concepts of remote sensing and data logistics, and NEON remote sensing data are introduced. Students learn how to apply spatial data processing and visualization skills using R coding program to...

    https://qubeshub.org/publications/1905/?v=1

  18. Digital Atlas of Ancient Life | Exploring the Diversity and History of Fossil Life

    08 Jun 2020 | Teaching Materials | Contributor(s):

    By Jonathan Hendricks

    Paleontological Research Institution

    The Digital Atlas project include field guides to fossils (including a mobile app), an online paleontology textbook, and a collection of over 500 virtual 3D models of fossil specimens.

    https://qubeshub.org/publications/1893/?v=1

  19. Caribbean coral reef structure and biodiversity - Comparing boosted regression tree & multiple regression approaches

    29 May 2020 | Teaching Materials | Contributor(s):

    By Eric Womack

    Virginia Commonwealth University

    Creating and comparing boosted regression tree models to multiple regression models.

    https://qubeshub.org/publications/1870/?v=1

  20. Data management and introduction to QGIS and RStudio for spatial analysis

    22 May 2020 | Datasets | Contributor(s):

    By Meghan Graham MacLean

    University of Massachusetts Amherst

    Students learn about the importance of good data management and begin to explore QGIS and RStudio for spatial analysis purposes. Students will explore National Land Cover Database raster data and...

    https://qubeshub.org/publications/1858/?v=1