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Understanding COVID-19 Biology to Design a Vaccine - Ethics supplement
08 Jul 2020 | Teaching Materials | Contributor(s):
By Keith A. Johnson
Bradley University College of Liberal Arts and Sciences
The adaptation to Understanding COVID-19 Biology to Design a Vaccine entails two ethics supplements. The first supplement addresses the use of off-label drugs in the pandemic (or other situation)....
Traditional Ecological Knowledge and Conservation
19 Jun 2020 | Teaching Materials | Contributor(s):
By Mary Heskel
Traditional Ecological Knowledge (TEK) is based on deep understanding of systems from observations made over hundreds to thousands of years. This resource connects TEK to modern conservation...
Redlining and Climate Change
Redlining was a racist, legal practice and its impacts are measurable in terms of environmental variables in US cities today. This resource examines redlining, urban environments, and climate change.
Design of gRNA Target and Donor
16 Jun 2020 | Teaching Materials | Contributor(s):
By Laurel Lorenz
This adaptation is for an upper level molecular biology laboratory course. In this adaptation, students learn the content required to design a gRNA target sequence and single-strand donor template...
15 Jun 2020 | Teaching Materials | Contributor(s):
By Mallory Bliss1, Alexzandria Khan1, Nandni Verma1, Kasandra Jean-Louise Riley1
This case study leads students through the process of proposing a drug for a novel protein. The Mpro protease of SARS-CoV-2 is explored in detail within the PDB. Aligns with first semester...
An introduction to population matrix models: a swirl lesson
By Jennifer Apple
Students will learn how to set up a population matrix model in R and use it for demographic analysis of a population, including projecting population growth, determining lambda and the stable age...
Why does Blood Flow Change? Investigating the Math of Blood Flow Dynamics
By Amy Troyer1, Brandi Morgante Handzlik1, Mary Phillips1
Pennsylvania College of Health Sciences
This collection of activities explores the relationship between blood flow, pressure, and the factors of resistance through graphs and modeling direct and inverse variation.
Hardy-Weinberg Equilibrium: a swirl resource
14 Jun 2020 | Teaching Materials | Contributor(s):
By Abigail E. Cahill
Students will use swirl to understand Hardy-Weinberg equilibrium. The lesson starts with observed numbers of individuals for each genotype, and students will work through a number of steps to...
Materials for Teaching the SIR Epidemic Model
By Glenn Ledder1, Michelle Homp1
University of Nebraska-Lincoln
This web page contains materials created by faculty of the University of Nebraska-Lincoln Department of Mathematics to teach basic fundamentals of mathematical epidemiology.
COVID-19 educational module | Department of Mathematics
By Glenn Ledder
University of Nebraska Lincoln
This resource is a module you can use to teach your students the basics of epidemic behavior using a model geared specifically to Covid-19. Students can address key questions using pre-designed...
COVID-19: On the way to a vaccine
13 Jun 2020 | Teaching Materials | Contributor(s):
By Nik Tsotakos
Penn State Harrisburg
This multi-part case study introduces the reader to the SARS-CoV-2 virus origins, the molecular basis of the infection, the development and severity of symptoms, and treatment.
How does increasing atmospheric carbon dioxide disrupt ecological systems? Results from FACE experiments across the globe.
12 Jun 2020 | Teaching Materials | Contributor(s):
By Courtney Campany
This module synthesizes key findings from forested CO2 enrichment experiments over the last 3 decades. Students should have a basic working knowledge of climate change, ecosystem nutrient cycles...
Understanding COVID-19 Biology to Design a Vaccine
By Keith Johnson1, Didem Vardar-Ulu2, Shuchismita Dutta3
1. Bradley University College of Liberal Arts and Sciences 2. Boston University 3. RCSB Protein Data Bank, Rutgers University
This multi-part case study introduces the reader to the SARS-CoV-2 virus, replication, and treatment. Additional worksheets introduce students to bioinformatics tools of 3-D protein visualization...
Analyzing Nutrient Simulation Experiments with a one-way ANOVA
09 Jun 2020 | Teaching Materials | Contributor(s):
By Rebecca North
We discuss what tests are appropriate to analyze the data from nutrient simulation experiments. They will conduct one-way ANOVAs and a post hoc test using a dummy dataset and interpret the results.
Cleaning Data with R and the Tidyverse in Swirl
By Rachel Hartnett
Oklahoma State University
The overall goal is to help students learn common data cleaning procedures on a dataset once they’ve collected measurements and before they are able to start their analysis. This swirl lesson is...
Genome Sequence Data in R using Biostrings (Swirl Lesson)
By Robert E Furrow
University of California, Davis
By the end of this lesson, students should be able to load FASTA files into R as DNAStringSets and use width() and alphabetFrequency(), combined with other functions like sum() and mean(), to...
Cleaning Biodiversity Data: Excel
By Debra Linton1, Molly Phillips2
1. Central Michigan University 2. iDigBio, Florida Museum of Natural History, University of Florida
Access and clean an open source polar bear dataset using Excel.
Digital Atlas of Ancient Life | Exploring the Diversity and History of Fossil Life
08 Jun 2020 | Teaching Materials | Contributor(s):
By Jonathan Hendricks
Paleontological Research Institution
The Digital Atlas project include field guides to fossils (including a mobile app), an online paleontology textbook, and a collection of over 500 virtual 3D models of fossil specimens.
Hemoglobin cooperativity and adaptations to high altitude living
05 Jun 2020 | Teaching Materials | Contributor(s):
By Alida Janmaat
University of the Fraser Valley
This resource accompanies the "How does blood carry oxygen?" chapter in the Integrating Concepts in Biology etext. Students evaluate the cooperativity of hemoglobin and adaptations to high altitude...
Landscape Indicators:Nutrients and Macroinvertebrates
31 May 2020 | Teaching Materials | Contributor(s):
By Stacy Cotey
Michigan Technological University
Modification of the Investigating Human Impacts on Stream Ecology Module to emphasize landscape indicators and incorporate inclusive practices.