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3D breast cancer tissue reconstruction
24 Aug 2018 | Teaching Materials | Contributor(s):
By Jeremy M Wojdak1, Kerri-Ann Norton2
1. Radford University 2. Johns Hopkins University
This module allows students to follow a researcher as she discovers new features of breast cancer tissue architecture, using 3D reconstructions of histological specimens.
17 Sep 2018 | Teaching Materials | Contributor(s):
A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
28 Feb 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
07 Jun 2019 | Teaching Materials | Contributor(s):
A Growing Concern: Sustaining Soil Resources through Local Decision Making
11 Jan 2018 | Teaching Materials | Contributor(s):
By Sarah Fortner1, Martha Murphy2, Hannah Scherer3
1. Wittenberg University 2. Santa Rosa Junior College 3. Virginia Tech
This module addresses this need by providing students the opportunity to examine the differences between intensively managed agricultural landscapes (e.g. grazelands, conventional tillage) and...
A Hands-on Introduction to Hidden Markov Models
04 Jan 2019 | Teaching Materials | Contributor(s):
By Tony Weisstein1, Elena Gracheva2, Zane Goodwin2, Zongtai Qi2, Wilson Leung2, Christopher D. Shaffer2, Sarah C.R. Elgin2
1. Truman State University 2. Washington University in St. Louis
A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.
A Pipeline in Paradise
03 Apr 2018 | Teaching Materials | Contributor(s):
By Victoria Schneider
I incorporated fracking into the case study instead of just focusing on building a pipeline, which allowed us to discuss fracking with this case study.
A Walk Through the Woods
09 Jan 2018 | Teaching Materials | Contributor(s):
By Jerome Chave1, David Coomes2, Steven Jansen3, Simon Lewis4, Nathan Swenson5, Amy Zanne6, Gaby Lopez-Gonzales7, J Ilic, RB Miller8, MC Wiemann9, Samantha Swauger10
1. The Academy of Europe 2. Cambridge University 3. Ulm University 4. University College London 5. University of Maryland 6. The George Washington University 7. University of Leeds 8. University of California, Berkeley 9. University of Florida 10. DryadLab
Data driven curriculum module from Dryad Digital Repository
Adaptation of Investigating human impacts on stream ecology: locally and nationally
10 Jun 2019 | Teaching Materials | Contributor(s):
By Catherine Sughrue Etter
Cape Cod Community College
TIEE Module- How does nutrient pollution impact stream ecosystems locally and nationally?
Adaptation of Terrestrial Trophic Cascades & Population Structure to a Non-Major’s Ecology Course
21 Dec 2018 | Teaching Materials | Contributor(s):
By John Howard Starnes
Southcentral Kentucky Community and Technical College
In this activity, students will use data from natural parks to examine trophic cascades.
Adapting InTeGrate Materials for Online Courses
22 Aug 2018 | Teaching Materials | Contributor(s):
By Tara Holmberg
Northwestern Connecticut Community College
As part of my second mentoring of the InTeGrate FMN for QUBES, I chose to focus on my conversion of several resources to an online course format.
Allele and Phenotype Frequencies in Rock Pocket Mouse Populations
23 Jan 2018 | Teaching Materials | Contributor(s):
By HHMI BioInteractive
A lesson that uses real rock pocket mouse data collected by Dr. Michael Nachman and his colleagues to illustrate the Hardy-Weinberg principle.
Altruism Simulation Activity
04 Oct 2019 | Teaching Materials | Contributor(s):
By Nicole Chodkowski
An altruism activity that uses a NetLogo altruism simulation.
Amino Acid Frequency
23 Dec 2018 | Teaching Materials | Contributor(s):
By Lou Gross1, Monica Beals1, Susan Harrell1
University of Tennessee Knoxville
This module introduces expected frequencies in the context of understanding amino acid composition. It is intended for an introductory biology audience.
Answer Checking - Modified for Environmental Data Analysis/Statistics Course
06 Jun 2019 | Teaching Materials | Contributor(s):
By Jennifer Prairie
University of San Diego
Modified answer checking worksheet from original BIOMAAP resource to include two additional questions relating to probability/P-values.
Answer Checking - Teaching Notes
28 May 2019 | Teaching Materials | Contributor(s):
By Jayme Dyer
Durham Technical Community College
I used this resource as-is. Included are my teaching notes. / This activity provides students with a set of strategies they can use to check their own answers. Students practice the answer checking...
15 Feb 2019 | Teaching Materials | Contributor(s):
This module introduces the Scatchard equation in the context of understanding antigen binding and the properties of antigens. It is intended for an introductory biology audience.
Aquatic Nutrient Levels and Climate Change
16 Jul 2019 | Teaching Materials | Contributor(s):
By Elli Bosch1, Kaycee Faunce1, Amanda Thompson
Virginia Commonwealth University
This learning module was designed to introduce students to the aquatic nutrients nitrogen and phosphorus, their roles in ecosystem function and nutrient pollution, and what impacts climate change...
AVIDA exercise on the role of mutation in evolution
21 May 2019 | Teaching Materials | Contributor(s):
By William Beachly
A tested exercise at the college freshmen level using AVIDA-Ed to generate and test a hypothesis about the relationship between mutation rate and the probability of evolving a useful function in...
Avida-ED Lab Book Summer 2017
out of 5 stars
27 Jul 2017 | | Contributor(s):: Wendy Johnson, Cory Kohn, Amy Lark, Louise Mead, Robert T Pennock, Jim Smith, Michael James Wiser
The Summer 2017 version of the Avida-ED Lab Manual includes the addition of an exercise that covers genetic drift (Exercise 4: Exploring Population Change Without Selection)