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Tags: Lab

Resources (1-20 of 436)

  1. Fitting Exponential and Logistic Growth Models to Bacterial Cell Count Data

    17 Dec 2021 | Teaching Materials | Contributor(s):

    By Adam Rumpf

    Florida Polytechnic University

    In this activity, students will model a noisy set of bacterial cell count data using both exponential and logistic growth models. For each model the students will plot the data (or a linear...

    https://qubeshub.org/publications/2831/?v=1

  2. Are you teaching biostatistics with R? Suggestions to help you as work with your students.

    16 Dec 2021 | Teaching Materials | Contributor(s):

    By Olivia Tabares-Mendoza

    Teaching students how to code and analyze data in R is important for the fields of biology and ecology. Olivia Tabares and the Ecological Forecasting Education Working Group created this resource...

    https://qubeshub.org/publications/2789/?v=1

  3. Ungrading to Decentered Grading Lightning Talk 2021 - YouTube

    06 Dec 2021 | Teaching Materials | Contributor(s):

    By Andrea Huntoon1, Brie Tripp, Derek Sollberger2, Didem Vardar-Ulu3, John Howard Starnes4, Laura Reed5, Melanie Lenahan6, Stacey Kiser7

    1. Fox Valley Technical College 2. UC Merced School of Natural Sciences 3. Boston University, Chemistry Department 4. Southcentral Kentucky Community and Technical College 5. University of Alabama 6. Raritan Valley Community College 7. Lane Community College, BioQUEST

    BIOME 2021 Ungrading Working Group Lightning Talk

    https://qubeshub.org/publications/2814/?v=1

  4. BIOME 2021 Scientist Spotlight/Data Nugget Working Group Video Recap

    06 Dec 2021 | Teaching Materials | Contributor(s):

    By Karen Klyczek1, Laurel Lorenz2, Pat Marsteller3, Laura Elizabeth Ong4, Elizabeth Pollock5, Amber Qureshi6, Katie Weglarz7, Suann Yang8

    1. University of Wisconsin-River Falls 2. Princeton 3. Emory University 4. King University 5. Stockton University 6. Unversity of Wisconsin Madison- Wisconsin Institute of Discovery 7. Westfield State University 8. Presbyterian College

    This two-minute overview video describes the work of the 2021 fall working group for Scientist Spotlight/Data Nugget course resources. Group members began developing new projects for a variety of...

    https://qubeshub.org/publications/2815/?v=1

  5. Linear Regression (Excel) and Cellular Respiration for Biology, Chemistry and Mathematics

    03 Dec 2021 | Teaching Materials | Contributor(s):

    By Irene Corriette1, Beatriz Gonzalez1, Daniela Kitanska2, Henriette Mozsolits2, Sheela Vemu3

    1. Santa Fe College 2. Passaic County Community College 3. Waubonsee Community College

    Students typically find linear regression analysis of data sets in a biology classroom challenging. These activities could be used in a Biology, Chemistry, Mathematics, or Statistics course. The...

    https://qubeshub.org/publications/2811/?v=1

  6. Sharing Stories: Developing OER around Podcasts

    03 Dec 2021 | Teaching Materials | Contributor(s):

    By J. Phil Gibson1, Carlos Christopher Goller2, Stefanie Kring3, Darlene Panvini4, Justin Pruneski5, Ellen Wisner6

    1. University of Oklahoma 2. North Carolina State University 3. Clarkson University 4. Belmont University 5. Heidelberg University 6. University of North Carolina Charlotte

    Our team met in the fall of 2021 to discuss and develop resources around podcasts. We created lists of podcast episodes for several courses, learned about listening guides, shared assignment...

    https://qubeshub.org/publications/2797/?v=1

  7. Microbiome Analysis with Oxford Nanopore 16S amplicon sequencing data

    30 Nov 2021 | Teaching Materials | Contributor(s):

    By Alice Tarun1, Mao-Lun Weng2

    1. St. Lawrence University 2. Westfield State University

    The resource is a brief description of an analysis pipeline for microbiome analysis of Oxford Nanopore 16S amplicon sequence data. We tested the Kraken 2 and Krona pipeline from nanogalaxy with...

    https://qubeshub.org/publications/2801/?v=1

  8. A Curious Display

    05 Nov 2021 | Teaching Materials | Contributor(s):

    By Margaret Waterman1, Brandon Call, Sandi Connelly2, Kristin Jenkins3, Sam Catherine Johnston4, Vedham Karpakakunjaram5, Viet Le6, Hayley Orndorf7, Melissa Skyer8, Barbara Spiecker9

    1. Southeast Missouri State University 2. Rochester Institute Of Technology 3. BioQUEST 4. CAST Inc. 5. Montgomery College 6. Rochester Institute of Technology 7. University of Pittsburgh 8. National Technical Institute for the Deaf at Rochester Institute of Technology 9. Oregon State University

    Case study on genetically modified organisms provided in English and American Sign Language.

    https://qubeshub.org/publications/1452/?v=2

  9. Investigating human impacts on Southeastern US stream ecology using R

    01 Nov 2021 | Teaching Materials | Contributor(s):

    By Alicia Caughman1, Emily Weigel1

    Georgia Institute of Technology

    Adaptation of the "Investigating human impacts on stream ecology: Scaling up from Local to National with a focus on the Southeast" specifically to focus on self-paced R code instruction

    https://qubeshub.org/publications/2220/?v=2

  10. A Changing Climate in the Hawaiian Wet Forest: In-Person and Virtual Curriculum for Field Courses at Puʻu Makaʻala NAR

    11 Oct 2021 | Teaching Materials | Contributor(s):

    By Teaching Change

    Curriculum for Puʻu Makaʻala Huakaʻi with the National Ecological Observatory Network (NEON), developed by Teaching Change. This module was created to guide Teaching Change Field Courses at Puʻu...

    https://qubeshub.org/publications/2763/?v=1

  11. Phage Comparative Genomics Lab Manual

    30 Aug 2021 | Teaching Materials | Contributor(s):

    By Andrew Kapinos1, Canela Torres2, Amanda Freise2

    1. University of California, San Diego 2. University of California, Los Angeles

    A lab manual containing detailed instructions for several bioinformatics tools (dot plots, Phamerator maps, phylogenetic trees, and gene content similarity), all of which enable students to perform...

    https://qubeshub.org/publications/2745/?v=1

  12. Applying phylogenetic tree building in MEGA X to forensic applications for identifying unknown specimens

    30 Aug 2021 | Teaching Materials | Contributor(s):

    By Nicholas Lorusso1, Denise Gemmellaro2

    1. University of North Texas at Dallas 2. Kean University

    This exercise is designed to guide a learner through the construction of phylogenetic trees as a means of addressing research questions in forensic science such as the identification of previously...

    https://qubeshub.org/publications/2567/?v=1

  13. Student-Driven Design-and-Improve Modules to Explore the Effect of Plant Bioactive Compounds in Three Model Organisms

    30 Aug 2021 | Teaching Materials | Contributor(s):

    By Iglika V. Pavlova

    University of North Carolina Greensboro

    Engaging and supporting introductory level students in authentic research experiences during required coursework is challenging. Plant bioactive compounds attract students' natural curiosity as...

    https://qubeshub.org/publications/2726/?v=1

  14. Nextstrain adaptations for Understanding COVID-19

    20 Aug 2021 | Teaching Materials | Contributor(s):

    By Keith A. Johnson

    Bradley University College of Liberal Arts and Sciences

    This resource introduces students to the use of Nextstrain and Nextclade to visualize the phylogeny of SARS-CoV-2 variants of concern and variants of interest. Terminology and an introduction to...

    https://qubeshub.org/publications/2545/?v=1

  15. Bird Beak Adaptations

    11 Aug 2021 | Teaching Materials | Contributor(s):

    By Miguel Morales

    Lake Worth Community Middle School

    Students will navigate through different stations experiencing simulations of adaptations, manipulations of 3D examples, and making connections to the standards to formulate hypotheses about...

    https://qubeshub.org/publications/2508/?v=1

  16. Will You Find This Humerus? Homology Lab

    11 Aug 2021 | Teaching Materials | Contributor(s):

    By Cassondra McHugh-Lowther

    Buchholz High School

    Students will compare and contrast the morphology of vertebrate forelimbs, and will use this knowledge to draw conclusions about their common ancestor and descent with modification.

    https://qubeshub.org/publications/2507/?v=1

  17. Venom: To Kill or Cure?

    11 Aug 2021 | Teaching Materials | Contributor(s):

    By Valerie Ledford

    Columbia High School

    In this case study, students will explore concepts of evolution, protein structure and function, taxonomy, and methods of scientific inquiry in a real-world way.

    https://qubeshub.org/publications/2506/?v=1

  18. Laboratory Math

    09 Aug 2021 | Teaching Materials | Contributor(s):

    By Andrea R. Beyer1, Pamela Lucas Connerly2, Christy Fillman3, Nick T. Peters4

    1. Virginia State University 2. Indiana University Southeast 3. University of Colorado, Boulder 4. Iowa State University

    Explanations and demonstrations on how to use mathematical equations for various laboratory purposes, including those specific to SEA-PHAGES (such as phage titer calculations) and those that are...

    https://qubeshub.org/publications/2505/?v=1

  19. Using Linear Regression Adaptation: Exploring Vector-borne diseases in an online classroom

    09 Aug 2021 | Teaching Materials | Contributor(s):

    By Darcy Ernst

    In this adaptation students in online classrooms will use linear regression at home and in synchronous online time to analyze real data on vector-borne diseases and explore how environmental...

    https://qubeshub.org/publications/2504/?v=1

  20. Climate change and Strawberries: A real-life problem-based activity for teaching ANOVA

    08 Aug 2021 | Teaching Materials | Contributor(s):

    By Nicole Hopkins1, Holly Felker1, Catharine Dickerson1, Terry O'Brien1, Dex Whittinghill1, Nathan Ruhl1

    Rowan University

    This is a real-life lab activity for teaching ANOVA using Problem-Based Learning and formatted for one-day (JMP or R) or two-day (JMP) implementations.

    https://qubeshub.org/publications/2503/?v=1