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3D breast cancer tissue reconstruction
17 Sep 2018 | Teaching Materials | Contributor(s):
By Jeremy M Wojdak1, Kerri-Ann Norton2
1. Radford University 2. Johns Hopkins University
This module allows students to follow a researcher as she discovers new features of breast cancer tissue architecture, using 3D reconstructions of histological specimens.
24 Aug 2018 | Teaching Materials | Contributor(s):
A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!
07 Jun 2019 | Teaching Materials | Contributor(s):
By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5
1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University
This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.
28 Feb 2019 | Teaching Materials | Contributor(s):
A Hands-on Introduction to Hidden Markov Models
04 Jan 2019 | Teaching Materials | Contributor(s):
By Tony Weisstein1, Elena Gracheva2, Zane Goodwin2, Zongtai Qi2, Wilson Leung2, Christopher D. Shaffer2, Sarah C.R. Elgin2
1. Truman State University 2. Washington University in St. Louis
A lesson in which students will understand the basic structure of an HMM, the types of data used in ab initio gene prediction, and its consequent limitations.
A Structured Inquiry Approach to Cotyledon Phenotyping
20 Dec 2018 | Teaching Materials | Contributor(s):
By Megan L Van Etten
Pennsylvania State University
In this lab, students will work with messy data to try to answer the question “How do plants inherit cotyledon color?”
27 Mar 2018 | Teaching Materials | Contributor(s):
By Lindsey Tuominen
Metropolitan State University
Additional Figures of the Day - Parasitology
30 May 2019 | Teaching Materials | Contributor(s):
By Elizabeth Hamman
These additional figures were used in a Parasitology course (juniors and seniors) at Radford University.
AIM-UP! Coal balls lesson
22 Jan 2018 | Teaching Materials | Contributor(s):
By Monte Garroutte1, Jordan Metzgar1, Hirotsugu Mori1
University of Alaska Museum of the North
In this activity, students learn about ancient plant life and climate change by examining coal balls. In addition to the lesson itself, information is provided on where to purchase coal ball peel...
AIM-UP! GIS and bats lesson
22 Jan 2018 | Teaching Materials
This lesson introduces the use of GIS (geographic information systems) in the study of biological questions, using bats as the model organism. This activity requires access to GIS software.
Amphibian Diversity: Species Richness and Precipitation
19 Mar 2019 | Teaching Materials | Contributor(s):
By Debra Linton1, Anna Monfils1, Molly Phillips2, Libby Ellwood3
1. Central Michigan University 2. iDigBio, Florida Museum of Natural History, University of Florida 3. iDigBio
This activity will explore how natural history specimen data can be used to investigate the relationship between precipitation levels in a region and species diversity of amphibians.
10 May 2019 | Teaching Materials | Contributor(s):
By Susan Butts1, Talia Karim2, Chris Norris1
1. Yale Peabody Museum of Natural History 2. University of Colorado, Boulder
Create a gallery of fossil organisms and identify distinctive body parts (wings, suckers, modified appendages) from the collection. Analyze and interpret these features to predict what type of...
Avian Censys Analysis
23 Jan 2019 | Teaching Materials | Contributor(s):
By Darcy Taniguchi
This Swirl course uses ecological data of bird counts and habitat variables to estimate inter-observer variability and the relationship of birds with habitat variables.
AVIDA exercise on the role of mutation in evolution
21 May 2019 | Teaching Materials | Contributor(s):
By William Beachly
A tested exercise at the college freshmen level using AVIDA-Ed to generate and test a hypothesis about the relationship between mutation rate and the probability of evolving a useful function in...
BAG Lab Manual Yeast
By Lisa Scheifele
Loyola University Maryland
This is the lab manual for yeast chromosome synthesis
Behavioral Genetics: Investigating the genes of a complex phenotype in fruit flies
03 Jan 2019 | Teaching Materials | Contributor(s):
By Craig E. Stanley, Jr., Charles Hadley S. King, IV, Michelle Thornton, Rob J. Kulathinal
Introductory genetics laboratory published as GSA Learning Resource
By Stephen Gosnell
Baruch College, City University of New York
This lesson focused on introducing students to binomial data analysis and reinforcing concepts of confidence intervals, p-value interpretation, and one- vs two-sided tests.
BIO103R: Bio 103 and 104 Labs in R at URI
29 Oct 2018 | Teaching Materials | Contributor(s):
By Rachel Schwartz1, Linda Forrester1
University of Rhode Island
GitHub repository for Bio 103 and 104 Labs in R at University of Rhode Island
Biogeography of plant-associated fungi: who lives where and why?
28 May 2018 | Teaching Materials | Contributor(s):
By Naupaka Bruce Zimmerman1, Peter Vitousek2
1. University of San Francisco 2. Stanford University
This dataset of fungal communities associated with the leaves an endemic Hawaiian tree provides students opportunities to explore relationships between environmental variables and microbial...
Bioinformatics - Investigating Sequence Similarity
04 Dec 2018 | Teaching Materials | Contributor(s):
By Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3
1. Adams State University 2. Fairmont State University 3. North Carolina State University
This laboratory module, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.