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Lesson VI - The Community Science Project
19 Nov 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
Genome Solver's Community Science Project was developed as a way to use the skills taught in the previous lessons. We're asking members of the community to provide instances of potential phage...
https://qubeshub.org/qubesresources/publications/859/?v=2
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Spectral Seismology Module
19 Nov 2019 | Teaching Materials | Contributor(s):
By D. S. Soule1, M. Weirathmuller1, G. Kroeger1, R. D. Gougis
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Based on a conceptual presentation of waveforms and filters
https://qubeshub.org/qubesresources/publications/1482/?v=1
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Climate Change Module
19 Nov 2019 | Teaching Materials | Contributor(s):
By Catherine O'Reilly1, D. C. Richardson2, R. D. Gougis2
1. Illinois State University 2. --
Students explore how climate is changing from the recent record
https://qubeshub.org/qubesresources/publications/1480/?v=1
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Lake Mixing Module
19 Nov 2019 | Teaching Materials | Contributor(s):
By Cayelan Carey, Jen Klug, R. L. Fuller1
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Students explore spatial and temporal patterns of lake mixing using high-frequency temperature data from lakes around the world.
https://qubeshub.org/qubesresources/publications/1479/?v=1
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Soil Respiration Module
19 Nov 2019 | Teaching Materials | Contributor(s):
By L. E. Nave1, N E Bader, Jen Klug
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Soils hold more carbon (C) than any other component of the terrestrial biosphere!
https://qubeshub.org/qubesresources/publications/1478/?v=1
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Stream Discharge Module
19 Nov 2019 | Teaching Materials | Contributor(s):
By N E Bader1, T. Meixner1, C. A. Gibson1, Catherine O'Reilly2, D. N. Castendyk1
1. -- 2. Illinois State University
Stream discharge is a fundamental measure of water supply in stream systems. Low discharge may cause problems with water supply and fish passage, while high discharge may mean flooding. In this...
https://qubeshub.org/qubesresources/publications/1477/?v=1
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Cross-Scale Interactions
19 Nov 2019 | Teaching Materials | Contributor(s):
By Cayelan Carey, Kaitlin Farrell
Students explore new modeling and computing tools while learning fundamental concepts about how lake phytoplankton blooms occur through cross-scale interactions.
https://qubeshub.org/qubesresources/publications/1476/?v=1
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Climate Change Effects on Lake Temperatures
19 Nov 2019 | Teaching Materials | Contributor(s):
By Cayelan Carey1, S Aditya2, K. Subratie2, R. Figueiredo2, Kaitlin Farrell1
1. Virginia Polytechnic Institute and State Univ 2. --
Students explore new modeling and computing tools while learning fundamental concepts about how climate change will affect lakes
https://qubeshub.org/qubesresources/publications/1475/?v=1
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Population Demography in Swirl
06 Nov 2019 | Teaching Materials | Contributor(s):
By Emily Weigel
Georgia Institute of Technology
The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
https://qubeshub.org/qubesresources/publications/1214/?v=3
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Neochromosomes: Creating transcriptional units with yeast Golden Gate assembly
29 Oct 2019 | Teaching Materials | Contributor(s):
By Eric Cooper
Hartwick College
This resource is a series of protocols using the yeast Golden Gate (yGG) method as developed by Neta Agmon and Leslie Mitchell in Jef Boeke’s lab to assemble a functional yeast gene with...
https://qubeshub.org/qubesresources/publications/1453/?v=2
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Neochromosomes: Creating transcriptional units with yeast Golden Gate assembly
28 Oct 2019 | Teaching Materials | Contributor(s):
By Eric Cooper
Hartwick College
This resource is a series of protocols using the yeast Golden Gate (yGG) method as developed by Neta Agmon and Leslie Mitchell in Jef Boeke’s lab to assemble a functional yeast gene with...
https://qubeshub.org/qubesresources/publications/1453/?v=1
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A Curious Display
28 Oct 2019 | Teaching Materials | Contributor(s):
By Margaret Waterman1, Brandon Call, Sandi Connelly2, Kristin Jenkins3, Sam Catherine Johnston4, Vedham Karpakakunjaram5, Viet Le6, Hayley Orndorf7, Melissa Skyer8, Barbara Spiecker9
1. Southeast Missouri State University 2. Rochester Institute Of Technology 3. BioQUEST 4. CAST Inc. 5. Montgomery College 6. Rochester Institute of Technology 7. University of Pittsburgh 8. National Technical Institute for the Deaf at Rochester Institute of Technology 9. Oregon State University
Case study on genetically modified organisms
https://qubeshub.org/qubesresources/publications/1452/?v=1
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Intro videos and terminology for GMOs, Transcription, Translation
28 Oct 2019 | Teaching Materials | Contributor(s):
By Sandi Connelly
Rochester Institute Of Technology
Compiled resources around GMOs and protein production including vocabulary, animations, videos, and games
https://qubeshub.org/qubesresources/publications/1446/?v=1
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Gelin’: Gel Electrophoresis Simulation
24 Oct 2019 | Teaching Materials | Contributor(s):
By Beyond Benign
Students will understand how DNA is separated into a fingerprint by using a chromatography activity to simulate gel electrophoresis.
https://qubeshub.org/qubesresources/publications/1448/?v=1
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Complete Set of Lessons
23 Oct 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with...
https://qubeshub.org/qubesresources/publications/860/?v=2
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Lesson III - Annotation
23 Oct 2019 | Teaching Materials | Contributor(s):
By Gaurav Arora
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
https://qubeshub.org/qubesresources/publications/1433/?v=1
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Lesson III - Annotation
23 Oct 2019 | Teaching Materials | Contributor(s):
By Gaurav Arora
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
https://qubeshub.org/qubesresources/publications/1432/?v=1
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Lesson V - Phylogenetics
22 Oct 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.
https://qubeshub.org/qubesresources/publications/858/?v=2
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Lesson VII - Synteny
22 Oct 2019 | Teaching Materials | Contributor(s):
By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
https://qubeshub.org/qubesresources/publications/1414/?v=2
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Lesson IV - Comparative Genomics
10 Oct 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson IV, Comparative Genomics, discusses some of the tools...
https://qubeshub.org/qubesresources/publications/857/?v=2