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07 Oct 2020 | Teaching Materials | Contributor(s):
By Emily Weigel1, Alycia Lackey2
1. Georgia Institute of Technology 2. Binghamton University
The students will practice identifying the appropriate basic statistical tests when given a scenario and learn how to run and interpret those statistical tests in R.
MiniWorkshop Follow-Up October 2, 2020
03 Oct 2020 | Teaching Materials | Contributor(s):
By Gaurav Arora1, Vinayak Mathur2
1. Gallaudet University 2. Cabrini University
A follow up to our mini workshop of August 14, 2020. Further information about the python pipeline for HGT and the new cytoscape lesson.
When did I lose my legs? A limbless lizard tale
11 Sep 2020 | Teaching Materials | Contributor(s):
By Patrick Kelly
Leesburg High School
Using oVERT project models students examine examples of extant traditional lizards, snakes and limbless lizards and create phylogenies based on trait and genetic data.
The Perfect Brew: An Activity Demonstrating Cell Counting and Hemocytometer Use
09 Sep 2020 | Teaching Materials | Contributor(s):
By Angela Consani1, Duane Doyle2, David L Jones1, Bara Sarraj3, Heather Seitz4
1. Kansas City Kansas Community College 2. Arkansas State University - Newport 3. Harold Washington College 4. Johnson County Community College
In this activity, students will explore the use of a hemocytometer for counting cells, demonstrate the relationship between the grid seen in the microscope with volume of liquid in suspension and...
Using Linear Regression to Explore Environmental Factors Affecting Vector-borne Diseases
02 Sep 2020 | Teaching Materials | Contributor(s):
By Andy Adams1, Jessica A Adams1, John J. Bray1, Tami Imbierowicz1, Suzanne Lenhart2, Breonna Martin1
1. Harford Community College 2. University of Tennessee
In this activity students will use linear regression to analyze real data on vector-borne diseases and explore how environmental factors such as climate change or population density influence the...
Nature’s Flying Machines: The Evolutionary Relationship of Avian Form & Function
28 Aug 2020 | Teaching Materials | Contributor(s):
By Melissa Haswell
In this series of activities, birds will be used as the model organism. The modules examine the connections between body form and function over time by investigating the relationship between avian...
Mini-Workshop August 14, 2020
By Vinayak Mathur1, Anne Rosenwald2, Gaurav Arora3
1. Cabrini University 2. Georgetown University 3. Gallaudet University
We reviewed the materials available on Genome Solver (other lessons here) and described our new python pipeline for examining horizontal gene transfer and a new synteny lesson in detail.
Backyard Beetles + Pollinators: EREN-NEON Flexible Learning Project
18 Aug 2020 | Teaching Materials | Contributor(s):
By Kaitlin Stack Whitney
Rochester Institute of Technology
Students observe insect pollinators and other floral visitors in their backyards, or campus, or nearby natural areas to describe plant-pollinator networks and assess how the assemblages from their...
Plants We Eat: Learning Form and Function from Fruits and Vegetables
10 Aug 2020 | Teaching Materials | Contributor(s):
By Katie Pearson
Cal Poly State University
This high school or undergraduate lab consists of four activities that guide students through learning about plant parts from the fruits and vegetables with which they are already familiar....
Obesity - An Epidemic with Unexpected Causes, Consequences, and Complexity
07 Aug 2020 | Teaching Materials | Contributor(s):
By Edward Freeman
St. John Fisher College
This dataset was collected from interviews conducted by the Centers for Disease Control and Prevention. State by state data are provided to explore the interactions of education, income, and...
A Letter to a Young Scientist: Prompting Students To Reflect On And Recognize Their Own Growth As Scientists
06 Aug 2020 | Teaching Materials | Contributor(s):
By Stephanie Conant1, Tom D'Elia2, Arturo Diaz3, Denise L Monti4, Richard Pollenz5, Vassie Ware6, Kathy Takayama7, Viknesh Sivanathan7
1. University of Detroit Mercy 2. Indian River State College 3. La Sierra University 4. University of Alabama at Birmingham 5. University of South Florida 6. Lehigh University 7. Howard Hughes Medical Institute
This activity is designed to prompt students to reflect on and recognize their own growth as scientists and, consequently, may help develop student self-efficacy and science identity.
5Qs: An Activity to Support Students Develop Skills to Interpret Research Observations
By Stephanie Conant1, Tom D'Elia2, Arturo Diaz3, Denise Monti4, Richard Pollenz5, Vassie Ware6, Kathy Takayama7, Viknesh Sivanathan7
5Qs (five questions) is a simple pedagogy tool research mentors can use to help students think through their observations systematically, to draw supported conclusions, and to decide on next steps,...
Lesson VII - Synteny
05 Aug 2020 | Teaching Materials | Contributor(s):
By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
Lesson III - Annotation
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
Phage Discovery Videos
By Billy Biederman1, Vic Sivanathan1
Howard Hughes Medical Institute
A compilation of videos to support teaching the concepts and protocols for discovering and working with phage.
Writing Genome Announcements Collaboratively
By Arturo Diaz1, Julia Lee-Soety2, Shima Chaudhary3, Richard Pollenz4
1. La Sierra University 2. Saint Joseph’s University 3. South Texas College 4. University of South Florida
This resources provides a framework for students to write a Genome Annoucement, collaboratively.
Graphing an Epidemic: West Africa Ebola Epidemic
28 Jul 2020 | Teaching Materials | Contributor(s):
By Lois Bartsch
Metropolitan Community College
In this activity, students will explore how the Ebola virus outbreak occurred in West Africa through graphing prevalence, incidence and mortality data from the three major countries that were...
Build-a-Genome Lab Manual for RFP Synthesis
By Lisa Scheifele
Loyola University Maryland
This lab manual describes a multi-week lab project for the design, assembly from oliognucleotides, cloning, and sequencing of the RFP gene. This resource was developed as part of NSF Award...
Yeast Scramble Lab Manual
By Mark Jones, Lisa Scheifele1
This laboratory manual includes protocols for SCRaMbling of yeast cells as well as phenotypic characterization. Appropriate student exercises are also included. This resource was developed as part...