Tags: modeling

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  1. Rosemary Farley


  2. Jennie D'Ambroise


  3. Erich McAlister


  4. Does Organelle Shape Matter?: Exploring Patterns in Cell Shape and Structure with High-Throughput (HT) Imaging

    27 Jan 2022 | Teaching Materials | Contributor(s):

    By Carlos C. Goller*1, Graham T. Johnson2, Kaitlyn Casimo2

    1. North Carolina State University 2. Allen Institute

    Organelle structure has been studied and visualized for decades; however, publicly available databases that use improved high-throughput microscopy of gene-edited cell lines have recently...


  5. Elizabeth Carlson


  6. Fitting Exponential and Logistic Growth Models to Bacterial Cell Count Data

    17 Dec 2021 | Teaching Materials | Contributor(s):

    By Adam Rumpf

    Florida Polytechnic University

    In this activity, students will model a noisy set of bacterial cell count data using both exponential and logistic growth models. For each model the students will plot the data (or a linear...


  7. Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems

    03 Nov 2021 | Teaching Materials | Contributor(s):

    By Alexis Garretson*1, Lorelei D. Crerar1

    George Mason University

    In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based...


  8. Promoting Climate Change Literacy for Non-majors: Implementation of an atmospheric carbon dioxide modeling activity as an inquiry-based classroom activity

    27 Aug 2021 | Teaching Materials | Contributor(s):

    By Mary A. Williams1, Deena Wassenberg1

    University of Minnesota

    Students who are directly involved in scientific activities develop a deeper understanding and appreciation of both scientific knowledge and the scientific process. This understanding is critically...


  9. Factor Structure Assessment of the Students Support Needs Scale-Augmented for African-American STEM Students

    22 Jul 2021 | Teaching Materials | Contributor(s):

    By Qingxia Li1, Thomas Gross2, Patricia Abbie McCarroll1, Catherine Hines2

    1. Fisk University 2. Western Kentucky University

    Poster on the impact of a performance pyramid-based peer-led learning community on course knowledge at a Historically Black University. Presented at the 2021 BIOME Institute.


  10. Sara Gandy


  11. May 31 2021

    Finding Your Inner Modeler (FYIM) Meetings Announced, Aug 2-6

    Finding Your Inner Modeler IVAn online collaborative project incubator for quantitative cell biologists and computational modelersNO REGISTRATION FEE! Apply by May 31, 2021 for fullest...


  12. Carlos Arregui


  13. “Leveling Up” In Your Favorite Video Game Math Modeling Activity

    03 Apr 2021 | Teaching Materials | Contributor(s):

    By Virginia Parkman1, Cameron Cook2, Greg Wiggins3, Suzanne Lenhart4

    1. National Institute for Mathematical and Biological Synthesis 2. National Institute for Mathematical and Biological Synthesis, University of Tennessee, Knoxville 3. Department of Mathematics, University of Tennessee, Knoxville 4. University of Tennessee

    Students write linear equations that represent their model for solving a problem about playing video games.


  14. Cell Collective: Learning biology with modeling and simulations

    27 Jul 2020 | Teaching Materials | Contributor(s):

    By Ehren Whigham1, Tomas Helikar1

    University of Nebraska-Lincoln

    Cell Collective is an online, research-grade modeling platform adapted to engage students in creating and simulating dynamic models of biological processes.


  15. Joseph Eason

    I am a mathematical biologist am interested in spatial ecology. I have done research bu writing mathematical models of ant territoriality investigating information use and decision making by ant...


  16. Katie Bjornen

    I'm a biologist teaching at the University of Montana Western. My interests include avian behavioral ecology, population genetics, and community ecology. I am passionate about encouraging...


  17. Eric Dyreson


  18. Robert Newman


  19. Shawn Paul Serbin


  20. Sydne Record