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2006-Wilensky-Reisman-Thinking Like a Wolf a Sheep or a Firefly
05 Apr 2023 | Teaching Materials | Contributor(s):
By U Wilensky
NA
We describe a computation-based approach that enables students to investigate the connections between different biological levels using agent-based, embodied modeling tools.
https://qubeshub.org/publications/3996/?v=1
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2012-Rusinko-Swan-Agent-Based Fabric Modeling Using Differential Equations
07 Apr 2023 | Teaching Materials | Contributor(s):
By Joseph Rusinko
NA
We use an agent-based modeling software, NetLogo, to simulate fabric drape by applying a modified mass spring system.
https://qubeshub.org/publications/4086/?v=1
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Making boxplots with ggplot2
Closed | Responses: 1
Hi all,
I'd like to be able use R (in which I am a rank novice) to plot out multivariate datasets from Behavior Space simulations in R (in which I am also a rank novice). In...
https://qubeshub.org/answers/question/11
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Agent-based and Individual-based Modeling: A Practical Introduction
03 Jun 2015 | | Contributor(s):: Steven F Railsback, Volker Grimm
From the authors website: "We designed this book to fill the need for an introductory text on agent-based modeling for scientists, for use both in university courses (graduate or upper level undergraduate) and by people teaching themselves. The book is not specific to any particular...
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An introduction to agent-based modeling.
02 Aug 2015 | | Contributor(s):: Marco A Janssen
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/849This is a textbook at an introductory level suitable for undergraduates, provided by Marco Janssen. From the book's Preface: This textbook...
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An Introduction to agent-based modeling.
23 Oct 2018 | Teaching Materials | Contributor(s):
By Marco A Janssen
Arizona State University
Introductory level textbook based on a collection of lecture notes from an undergraduate course on agent-based modeling at Arizona State University.
https://qubeshub.org/publications/849/?v=1
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Anne Elizabeth Yust
https://qubeshub.org/community/members/8345
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Bailie Lavan
https://qubeshub.org/community/members/8474
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Being the turtle: agent-based modeling workshop at Humboldt State University
06 Aug 2015 |
Posted by Jeremy M Wojdak
What could bring ecologists, toxicologists, philosophers, and sociologists, Ph.D. students, professors, and federal agency scientists together, 300 miles from nowhere? Turtles. Yes, that's...
https://qubeshub.org/news/blog/2015/08/being-the-turtle-agent-based-modeling-workshop-at-humboldt-state-university
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Breeding synchrony in colonial birds: from local stress to global harmony
02 Aug 2015 | | Contributor(s):: Roger Jovani, Volker Grimm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/871This is a supplemental resource for Agent-based and Individual-based Modeling: a practical introduction by Railsback and Grimm (2012). This is a reprint from...
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Breeding synchrony in colonial birds: from local stress to global harmony
25 Oct 2018 | Teaching Materials | Contributor(s):
By Volker Grimm, Roger Jovani1
Helmholtz Center for Environmental Research
This is a supplemental resource for ABM
https://qubeshub.org/publications/871/?v=1
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COVID-19 Spread NetLogo ABM
25 Jun 2023 | Teaching Materials | Contributor(s):
By Anne Elizabeth Yust1, Saharsh Talwar2
1. The New School 2. University of Pittsburgh
This project aimed to utilize agent-based modeling in NetLogo to create a simulation of COVID-19 spread in a traditional college classroom. The model allows for an evaluation of different...
https://qubeshub.org/publications/4451/?v=1
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Diseasebots
12 Jun 2018 | Teaching Materials | Contributor(s):
By Arietta Fleming-Davies1, Skylar Hopkins2
1. QUBES; Radford University 2. UC Santa Barbara and Virginia Tech
This module explores the effects of host density on contact rates and transmission of pathogens or mutualist symbionts using a hands-on simulation, a computer agent-based model in NetLogo, and an...
https://qubeshub.org/publications/641/?v=1
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Ebola Model
26 Apr 2019 | | Contributor(s):: Michael James, Lauren Mayer, Keely Copperthite
Simple agent based SIR model of Ebola epidemics.
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Exploring Disease Transmission on Networks with NetLogo
10 May 2015 | | Contributor(s):: Winfried Just, Ying Xin
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Genetic Drift Simulation - NetLogo
23 Jun 2016 | | Contributor(s):: Tony Weisstein
This model simulates genetic drift in a population. The user can control the population size, whether the population is subdivided into separate local populations, and the amount of gene flow (if any) between local populations. Phenotype frequency in each subpopulation is plotted as a...
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Human T-Cell Pathogen Response Model
16 Oct 2015 |
Posted by Austin Dunn
I am currently working alone, but am still open to collaborate with any parties with similar interests.
I am striving for Option 5, with the ability to take Option 2 if I don't have...
https://qubeshub.org/community/groups/introquantbio/blog/2015/10/human-t-cell-pathogen-response-model
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Jul 27 2015
Individual-based Modeling Workshop
IBM Workshop with NetLogoJuly 27-31, 2015Humboldt State UniversityArcata, CaliforniaApplications for the July 2015 course are now being accepted through April 6, or when course is full.
https://qubeshub.org/news/events/details/129
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List of models in which observed patterns are Important
02 Aug 2015 | | Contributor(s):: Steven F Railsback, Volker Grimm
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/876Supplemental material for Chapter 18 of Agent-Based and Individual-Based Modeling: A practical introduction by Railsback and Grimm (2012). This is a list of...
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List of models in which observed patterns are Important
26 Oct 2018 | Teaching Materials | Contributor(s):
By Steven F Railsback1, Volker Grimm
Lang Railsback & Associates
Supplemental material for ABM
https://qubeshub.org/publications/876/?v=1