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Intro videos and terminology for GMOs, Transcription, Translation
28 Oct 2019 | Teaching Materials | Contributor(s):
By Sandi Connelly
Rochester Institute Of Technology
Compiled resources around GMOs and protein production including vocabulary, animations, videos, and games
Genome Solver: Complete Set of Lessons
23 Oct 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
The Genome Solver Project began as a way to teach faculty some basic skills in bioinformatics - no coding or scripting. These Lessons also work well in the undergraduate classroom, culminating with...
Lesson V - Phylogenetics
22 Oct 2019 | Teaching Materials | Contributor(s):
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.
Lesson VII - Synteny
By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
Get Started With GIS in Open Source Python Workshop
15 Oct 2019 | Teaching Materials | Contributor(s):
By Leah Wasser1, Jenny Palomino1, Joe McGlinchy1
Earth Lab - University of Colorado, Boulder
There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...
Introduction to Version Control and Git Workshop
By Leah Wasser, Max Joseph
Learn how to use version control with Git to work collaboratively and back up your work.
Writing Clean Code in R Workshop
By Max Joseph1, Leah Wasser
When working with data, you often spend the most amount of time cleaning your data. Learn how to write more efficient code using the tidyverse in R.
Introduction to Earth Data Science Textbook
By Jenny Palomino, Leah Wasser
Introduction to Earth Data Science is an online textbook for anyone new to open reproducible science and the Python programming language. There are no prerequisites for this material, and no prior...
Earth Analytics in R Course
By Leah Wasser
Earth analytics is an advanced, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Earth Analytics Bootcamp Course
By Jenny Palomino1, Leah Wasser
The Earth Analytics Bootcamp is a three-week introductory-level course taught by instructors in Earth Lab and is a part of the Professional Certificate in Earth Data Analytics - Foundations at CU...
Lesson IV - Comparative Genomics
10 Oct 2019 | Teaching Materials | Contributor(s):
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson IV, Comparative Genomics, discusses some of the tools...
Lesson III - Annotation
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
Altruism Simulation Activity
04 Oct 2019 | Teaching Materials | Contributor(s):
By Nicole Chodkowski
An altruism activity that uses a NetLogo altruism simulation.
Introduction to Data Management and Metadata using NEON aquatic macroinvertebrate data
30 Sep 2019 | Teaching Materials | Contributor(s):
By Kaitlin Stack Whitney
Rochester Institute of Technology
This lesson focuses on understanding metadata, the data about the data, using aquatic macroinvertebrate abundance and species information from a variety of NEON sampling locations.
Electrical and chemical communication in the nervous system
31 Aug 2019 | Teaching Materials | Contributor(s):
By Patrick Cafferty
This activity guides students through an online tutorial to examine the electrical and chemical communication of neurons.
REMNet Tutorial, R Part 5: Normalizing Microbiome Data in R 5.2.19
28 Aug 2019 | Teaching Materials | Contributor(s):
By Jessica Joyner
CUNY Brooklyn College
Video on normalizing microbiome data from the Research Experiences in Microbiomes Network
Using Synthetic Biology to Teach Data Science
30 Jul 2019 | Teaching Materials | Contributor(s):
By Margaret S Saha1, Beteel Abu-Ageel1, Sanjana Challa1, Xiangyi Fang1, Chai Hibbert1, Anna Isler1, Elias Nafziger1, Adam Oliver1, Hanqiu Peng1, Julia Urban1, Vivian Zhu1
College of William and Mary
Poster and supplemental materials on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
Optimal Foraging in Swirl
15 Jul 2019 | Teaching Materials | Contributor(s):
By Mary Elizabeth McWhirt1, Emily Weigel1
Georgia Institute of Technology
This lesson centers around the marginal value theorem (MVT, Charnov 1976), which describes how animals should forage in patches. It serves as a pre-lab to teach MVT basics, vectors, ANOVA, and...
Examining human impacts on tusk evolution in elephants using authentic research data using Serenity
13 Jul 2019 | Teaching Materials | Contributor(s):
By Kaitlin Bonner
St. John Fisher College
In this activity students explore and analyze real, authentic research data paired with HHMI’s “Selection for Tuskless Elephants” video in a hands-on investigation of human impacts on elephant...
Quantifying The Drivers and Impacts of Natural Disturbance Events – The 2013 Colorado Floods
12 Jul 2019 | Teaching Materials | Contributor(s):
By Heather Susanne Zimbler-DeLorenzo
Georgia State University Perimeter College
This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of...