All Categories (21-40 of 48)

1. Investigating Trade-offs among Mammal Traits

   out of 5 stars 

   07 Jun 2018 | | Contributor(s):: Jackie Matthes

   This app draws on a large species-level dataset with metabolic, life history, and ecological traits of most living and recently extinct mammal species. Users can select and plot traits, fit linear models to the data, and query displayed datapoints.

2. IONTW

   out of 5 stars 

   28 Jan 2015 | | Contributor(s):: Drew LaMar

   Simulates both discrete and continuous time agent-based models of infectious disease dynamics on networks.

3. IPMpack: an R package for Integral Projection Models

   out of 5 stars 

   19 Jan 2015 | | Contributor(s):: C. Jessica E. Metcalf, Sean M. McMahon, Roberto Salguero-Gómez, Eelke Jongejans, Cory Merow

   This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/779IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models. An IPM is a demographic tool to explore the...

4. IPMpack: an R package for Integral Projection Models

   11 Sep 2018 | Teaching Materials | Contributor(s):

   By C. Jessica E. Metcalf¹, Sean M. McMahon², Roberto Salguero-Gómez³, Eelke Jongejans⁴, Cory Merow⁵

   1. University of Oxford 2. Smithsonian Tropical Research Institute 3. University of Queensland 4. Radbound University Nijmegen 5. STRI and University of Connecticut

   IPMpack is an R package (R Development Core Team 2013) that allows users to build and analyse Integral Projection Models.

   https://qubeshub.org/publications/779/?v=1

5. Java Applets for Power and Sample Size

   out of 5 stars 

   10 Mar 2015 | | Contributor(s):: Russell Lenth

   This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/899From the website:This software is intended to be useful in planning statistical studies.  It is not intended to be used for analysis of data that have already been...

6. Jupyter Lab

   out of 5 stars 

   13 Jul 2018 | | Contributor(s):: Erich Huebner

   An extensible environment for interactive and reproducible computing, based on the Jupyter Notebook and Architecture.

7. Jupyter Notebook

   out of 5 stars 

   05 May 2017 | | Contributor(s):: Martin Hunt

   Starts the Jupyter notebook server in your "notebooks" directory in your home directory.

8. Ka-me: Voronoi Image Analyzer 1.0

   out of 5 stars 

   15 Jun 2015 | | Contributor(s):: John R Jungck

   Ka-me is a Voronoi image analyzer that allows users to analyze any image with a convex polygonal tessellation or any spatial point distribution by fitting Voronoi polygons and their dual, Delaunay triangulations, to the pattern.

9. Mesquite

   out of 5 stars 

   18 Jun 2015 |

   A modular system for evolutionary analysis

10. Modeling the Mechanisms of Evolution

    out of 5 stars 

    25 May 2018 | | Contributor(s):: Jackie Matthes

    Simulate population-level mechanisms of evolution: genetic drift, gene flow, and natural selection.

11. NetLogo

    out of 5 stars 

    23 Jan 2015 |

    Multi-agent Programmable Modeling Environment

12. OpenRefine

    out of 5 stars 

    18 Jan 2016 |

    OpenRefine (formerly Google Refine) is a powerful tool for working with messy data: cleaning it; transforming it from one format into another; and extending it with web services and external data.

13. Outstanding Oaks: Quercus phenology at NEON sites

    out of 5 stars 

    22 Jun 2018 | | Contributor(s):: Jackie Matthes

    This app visualizes data from the National Ecological Observatory Network (NEON) observations of oak phenology at three different sites.

14. Populus: Simulations of Population Biology

    out of 5 stars 

    09 Jan 2015 | | Contributor(s):: D. N. Alstad

    This resource has been updated - find the current version here: https://qubeshub.org/publications/352The Populus software contains a set of simulations that we use to teach population biology and evolutionary ecology at the University of Minnesota. Simulation models may be chosen from a...

15. PPLANE

    out of 5 stars 

    02 Apr 2015 |

    PPLANE is a tool for Phase Plane Analysis of a System of Differential Equations of the form: x' = dx/dt = f(x,y), y' = dy/dt = g(x,y).

16. Predator-prey models as XPP files

    out of 5 stars 

    12 Nov 2018 | | Contributor(s):: Eli E Goldwyn

    These are the .ode files that XPP takes as input.  lv.ode is the Lotka-Volterra predator-prey model rm.ode is the Rosenzweig-MacArthur model rm3.ode is the Rosnezweig-MacArthur model but with predation following a Holling Type III functional response. The file rm.ode is...

17. QtOctave

    out of 5 stars 

    19 Feb 2015 |

    QtOctave is an open source GUI front-end application for GNU Octave.

18. R Commander

    out of 5 stars 

    04 Sep 2015 | | Contributor(s):: Drew LaMar

    R provides a powerful and comprehensive system for analysing data and when used in conjunction with the R-commander (a graphical user interface, commonly known as Rcmdr) it also provides one that is easy and intuitive to use.

19. R Shiny App Example

    out of 5 stars 

    09 May 2018 | | Contributor(s):: Drew LaMar

    This is a simple example used to demonstrate what is needed to host your R Shiny app on QUBESHub.

20. Radiant

    out of 5 stars 

    16 Sep 2015 |

    Business analytics using R and Shiny.