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Lesson V - Phylogenetics
22 Oct 2019 | Teaching Materials | Contributor(s):
By Anne Rosenwald1, Gaurav Arora2, Vinayak Mathur3
1. Georgetown University 2. Gallaudet University 3. Cabrini University
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson V is an introduction to Phylogenetics.
Lesson VII - Synteny
By Gaurav Arora1, Anne Rosenwald2, Vinayak Mathur3
1. Gallaudet University 2. Georgetown University 3. Cabrini University
The lesson teaches about synteny or the order of genes along a chromosome, which is useful for looking at orthologous genes between two species or strains.
Inclusive Pedagogy for Life Science Education Tagging Ontology
17 Oct 2019 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton1, Sharon Rivera2, Bryan Dewsbury3
1. Bates College and QUBES 2. Tacoma Community College 3. University of Rhode Island
Earth Analytics in Python Course
15 Oct 2019 | Teaching Materials | Contributor(s):
By Leah Wasser, Jenny Palomino, Chris Holdgraf1
University of California - Berkeley
Earth analytics is an intermediate, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Get Started With GIS in Open Source Python Workshop
By Leah Wasser1, Jenny Palomino1, Joe McGlinchy1
Earth Lab - University of Colorado, Boulder
There are a suite of powerful open source python libraries that can be used to work with spatial data. Learn how to use geopandas, rasterio and matplotlib to plot and manipulate spatial data in...
Introduction to Version Control and Git Workshop
By Leah Wasser, Max Joseph
Learn how to use version control with Git to work collaboratively and back up your work.
Writing Clean Code in R Workshop
By Max Joseph1, Leah Wasser
When working with data, you often spend the most amount of time cleaning your data. Learn how to write more efficient code using the tidyverse in R.
Introduction to Earth Data Science Textbook
By Jenny Palomino, Leah Wasser
Introduction to Earth Data Science is an online textbook for anyone new to open reproducible science and the Python programming language. There are no prerequisites for this material, and no prior...
Earth Analytics in R Course
By Leah Wasser
Earth analytics is an advanced, multidisciplinary course that addresses major questions in Earth science and teaches students to use the analytical tools necessary to undertake exploration of...
Earth Analytics Bootcamp Course
By Jenny Palomino1, Leah Wasser
The Earth Analytics Bootcamp is a three-week introductory-level course taught by instructors in Earth Lab and is a part of the Professional Certificate in Earth Data Analytics - Foundations at CU...
Lesson IV - Comparative Genomics
10 Oct 2019 | Teaching Materials | Contributor(s):
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson IV, Comparative Genomics, discusses some of the tools...
Lesson III - Annotation
Genome Solver began as a way to teach undergraduate faculty some basic skills in bioinformatics; no coding or scripting is required. Lesson III introduces Annotation, or assigning meaning to all...
Optimal Foraging in Swirl
08 Oct 2019 | Teaching Materials | Contributor(s):
By Mary Elizabeth McWhirt1, Emily Weigel1
Georgia Institute of Technology
This lesson centers around the marginal value theorem (MVT, Charnov 1976), which describes how animals should forage in patches. It serves as a pre-lab to teach MVT basics, vectors, ANOVA, and...
Altruism Simulation Activity
04 Oct 2019 | Teaching Materials | Contributor(s):
By Nicole Chodkowski
An altruism activity that uses a NetLogo altruism simulation.
30 Sep 2019 | Teaching Materials | Contributor(s):
By Alexa Clemmons1, Jerry Timbrook2, Jon Herron1, Alison Crowe1
1. University of Washington 2. University of Nebraska-Lincoln
The BioSkills Guide comprises program- and course-level learning outcomes that elaborate what general biology majors should be able to do by the time they graduate.
Introduction to Data Management and Metadata using NEON aquatic macroinvertebrate data
By Kaitlin Stack Whitney
Rochester Institute of Technology
This lesson focuses on understanding metadata, the data about the data, using aquatic macroinvertebrate abundance and species information from a variety of NEON sampling locations.
Modeling the lac Operon to Understand the Regulation of Gene Expression in Prokaryotes
27 Sep 2019 | Teaching Materials | Contributor(s):
By Sam S Donovan
University of Pittsburgh
This resource is a recitation activity designed for an introductory biology course in which students explore a lac operon simulation (https://qubeshub.org/resources/phetlacoperon).
Population Demography in Swirl
26 Sep 2019 | Teaching Materials | Contributor(s):
By Emily Weigel
The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
Population Ecology in Swirl: Estimating Population Sizes
By Mary E McWhirt, Emily Weigel1
The students will learn to estimate population sizes and consider assumptions of mathematical models and their applicability to the ecology of an organism/population
11 Sep 2019 | Teaching Materials | Contributor(s):
By Claudia Neuhauser1, David Phillip Schladt2
1. University of Houston 2. University of Minnesota
Numbers Count Excel resource