Find information on common questions and issues.
Check on the status of your correspondences with members of the QUBES team.
Biodiversity research using digitized, internet-based natural history collections
17 Dec 2019 | Teaching Materials | Contributor(s):
By Kaitlin Stack Whitney
Rochester Institute of Technology
Collections based research is a critical tool for organismal biology and biodiversity research. Yet natural history collections have a complicated past. This multi-class module examines the...
Using Synthetic Biology to Teach Data Science
30 Jul 2019 | Teaching Materials | Contributor(s):
By Margaret S Saha1, Beteel Abu-Ageel1, Sanjana Challa1, Xiangyi Fang1, Chai Hibbert1, Anna Isler1, Elias Nafziger1, Adam Oliver1, Hanqiu Peng1, Julia Urban1, Vivian Zhu1
College of William and Mary
Poster and supplemental materials on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
Quantifying The Drivers and Impacts of Natural Disturbance Events – The 2013 Colorado Floods
12 Jul 2019 | Teaching Materials | Contributor(s):
By Heather Susanne Zimbler-DeLorenzo
This lesson focuses on ways that scientists identify and use data to understand ecological disturbance events using data from five public datasets. The main lesson focused on interpretation of...
26 Jun 2019 | Teaching Materials | Contributor(s):
Abstract for poster on using synthetic biology to introduce students to meaningful data mining, analysis, and application to engineering novel biological constructs.
BioQUEST / QUBES Summer Workshop 2019 - Code of Conduct
23 Nov 2018 | Teaching Materials | Contributor(s):
By Kristin Jenkins1, Hayley Orndorf2
1. BioQUEST 2. University of Pittsburgh
We are using this project to publish and version our meeting code of conduct. Our goal is to engage the conference community in the discussion of the code of conduct to raise awareness about it.
Questions For Biology: Concept Inventories for Biological Concepts
30 Oct 2018 | Teaching Materials | Contributor(s):
By Gülnur Birol1, Greg Bole1, Sunita Chowrira1, Bridgette Clarkston1, Thomas Deane1, Malin Hansen1, Erica Jeffery1, Pam Kalas1, Kathy Nomme1, Rosemary Oh-McGinnis1, Angie O’Neill1, Carol Pollock1, Joan Sharp1, Karen Smith1, Michelle Tseng1
University of British Columbia
The Questions For Biology (Q4B) team aims to create validated concept inventories for use in diagnosing student misconceptions, informing teaching practices and tracking learning gains across a...
Computational Biology using R
By Hong Qin
University of Tennessee Chattanooga
This is an introductory level course on computational biology.
ModelSim Population Biology Unit
By Uri Wilensky1, Paulo Blikstein2, Corey Brady3, David Figlio1, Pratim Sengupta4, Jason Bertsche1, Yu (Bryan) Guo1, Nathan Holbert1, Michael Novak1, Firat Soylu1, Aditi Wagh1, Gokul Krishnan4, Brogan Miller2, Shima Salehi2
1. Northwestern University 2. Stanford University 3. Inquire Learning 4. Vanderbilt University
This resource provides rich student modeling activities and materials, teacher resources, and much more, in the realm of agent based models applied to population biology.
Statistics for Biologists
By Magdalena Skipper1, Ritu Dhand1, Helen Pearson1, Francesca Cesari1
There is no disputing the importance of statistical analysis in biological research, but too often it is considered only after an experiment is completed, when it may be too late.
Tools: New tools for new science
By Harry Shum
A collection of computational, modeling and data analysis tools developed at Microsoft Research Labs.
Molecular Biology of the Cell (MBoC)
23 Oct 2018 | Teaching Materials
An online journal focusing upon generally-applicable studies of cell biology.
Data Analysis for the Life Sciences
23 Oct 2018 | Teaching Materials | Contributor(s):
By Rafael A Irizarry1, Michael I Love1
An online stats book written completely in R
BioNumbers-the database of key numbers in molecular and cell biology
19 Oct 2018 | Teaching Materials | Contributor(s):
By Ron Milo1, Paul Jorgensen2, Michael Springer3
1. Weizmann Institute of Science 2. Harvard Medical School 3. Beth Israel Deaconess Medical Center
BioNumbers is a database of key numbers in molecular and cell biology—the quantitative properties of biological systems of interest to computational, systems and molecular cell biologists
BioNumbers: The Database of Useful Biological Numbers
17 Oct 2018 | Teaching Materials | Contributor(s):
By Ron Milo1, Paul Jorgensen2, Michael Springer2
1. Weizmann Institute of Science 2. Harvard Medical School
A database of biological numbers that you can search and browse.
11 Sep 2018 | Teaching Materials | Contributor(s):
By Nicholas G. Reich1, Andrea S. Foulkes1, Harrel Blatt1, Eric A. Cohen1, Gregory Matthews1
University of Massachusetts
statsTeachR is an open-access, online repository of modular lesson plans, a.k.a. "modules", for teaching statistics using R at the undergraduate and graduate level.
Cookbook for R
By Winston Chang
The goal of the cookbook is to provide solutions to common tasks and problems in analyzing data.
Assessment of Science Inquiry
17 Jan 2018 | Teaching Materials | Contributor(s):
By Sabra Lee, George Hein
Resource from the 2015 BioQUEST Summer Workshop
QUBES: Supporting faculty in the teaching of mathematical biology
22 Dec 2017 | Teaching Materials | Contributor(s):
By Carrie Diaz Eaton1, Sam S Donovan2, Tom Gower3, Kristin Jenkins4, Drew LaMar5, DorothyBelle Poli6, Bob Sheehy7, Jeremy M Wojdak7
1. Unity College 2. University of Pittsburgh 3. North Carolina State University 4. BioQUEST 5. College of William and Mary 6. Roanoke College 7. Radford University
Abstract for a presentation that was part of a minisymposium at SMB 2015.
Q4B: Questions For Biology
out of 5 stars
08 Dec 2015 | | Contributor(s):: Gulnur Birol, Greg Bole, Sunita Chowrira, Bridgette Clarkston, Thomas Deane, Malin Hansen, Erica Jeffery, Pam Kalas, Kathy Nomme, Rosemary Oh-McGinnis, Angie O’Neill, Carol Pollock, Joan Sharp, Karen Smith, Michelle Tseng
This resource has been updated - find the current version here: https://qubeshub.org/qubesresources/publications/908The Questions For Biology (Q4B) team aims to create validated concept inventories for use in diagnosing student misconceptions, informing teaching practices and tracking...
QUBES: Supporting faculty in the teaching of mathematical biology
21 Oct 2015 | | Contributor(s):: Carrie Diaz Eaton, Sam S Donovan, Tom Gower, Kristin Jenkins, Drew LaMar, DorothyBelle Poli, Bob Sheehy, Jeremy M Wojdak
This resource has been updated - find the current version here: https://qubeshub.org/publications/218Faculty are working hard to meet the career needs of students in mathematical biology at institutions across the country and the world. This may be by creating mathematical biology courses or...