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QUBES FORGE

Tool Development

Welcome to QUBES FORGE, the tool development area of QUBES. The following pages are maintained by the various owners of each tool. Many of these tools are available as Open Source, and you can download the code via Subversion from this site. Some tools are closed source at the request of the authors, and only a restricted development team has access to the code. See each tool page for details.

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Available Tools

Title Alias Status
BactVsPhage bactvsphage open source
Biology Genomes Lab bglab open source
Bio Lab bio open source
biology lab biolab open source
bio biotool open source
bio242l biotool2123 open source
bio242lc biotool242lc open source
COPASI copasi closed source
Cats Teach Stats Binomial Test ctsbintest open source
Collecting and analyzing binomial data ctsbintestswirl open source
DFIELD dfield closed source
Darby Lab dlab open source
Quantum dot lab dot open source
Ebola Model ebolamodel open source
erichs tools erichs closed source
E Test tool etest closed source
Modeling the Mechanisms of Evolution evopopulations open source
FastQC fastqc closed source
Fitting of data by eye fitparam open source
Bio genomes and evolution gandeflower closed source
phylogenetic tree activity genomes open source
Example Git with R gitr open source
Google Charts Example - Bubble googlecharts open source
Cultivating Your Growth Mindset growthmindset open source
hubcheck parameter passing tool hppt open source
rstudio idk open source
ImageJ imagej closed source
IBIO imagej000 open source
IONTW iontw open source
Lab job open source
Jupyter Notebook jupyter open source
Jupyter Lab jupyterlab closed source
Ka-me: Voronoi Image Analyzer 1.0 kame closed source
khamada khamada open source
Lab 8 242 lab8242 open source
Areeya's laptop laptop open source
Jose Luis Garcia Jimenez ljose open source
Investigating Trade-offs among Mammal Traits mammaltraits open source
MATLAB Homework matlab open source
Lizard measure open source
Mesquite mesquite closed source
mesquite lab1 mesquite1 open source
Mesquite142357 mesquite142357 open source
Mesquite Lab mesquitebio242 open source
Bio lab 13 mesquitelab13 open source
Mesquite for Phylogeny Tree making mesquiterizk open source
Interpreting and Building Phylogenetic Trees meswuite open source
Macrosystems EDDIE: Introduction to Ecological... module5 open source
mesquite phylogeny mosquito open source
Outstanding Oaks: Quercus phenology at NEON sites neonoakpheno open source
NetLogo netlogo open source
Genomes Lab nolan open source
OpenRefine openrefine closed source
Gene Machine: The Lac Operon phetlacoperon open source
Phylogenetic Trees Lab phylo closed source
Phylogenetic Tree phylogen open source
phylogenetic phylogenetic open source
Phylogenetics phylogenetics open source
phylogenetic chart phylogeny open source
PPLANE pplane closed source
qdot qdot open source
QtOctave qtoctave closed source
Quebes bio lab qubes open source
Qubes qubes13 open source
Bio tool qubesbio242l open source
QubesMesquite qubesmesquite open source
Radiant radiant open source
Radiant Lite radiantlite open source
R Commander rcommander closed source
RStudio IDE for R rstudio closed source
RStudio 2 rstudio2 open source
rubye rubye open source
Serenity serenity open source
R Shiny App Example shinyappex open source
soft soft open source
Statistical Power for One-Sample t-Test statpowerviz open source
Swirl swirl open source
Bio Lab242L tree open source
Phylogenic Tree Lab treeyee open source
Wood Density wooddensity closed source
Workspace workspace closed source
Workspace 10 workspace10 closed source
Workspace Dev workspacedev closed source
XPPAUT xppaut closed source
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