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Developing a phylogram from computational resources.

Author(s): Melanie Lenahan1, Shea Cinquemani1

Raritan Valley Community College

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Summary:
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

Licensed under CC Attribution-NonCommercial-ShareAlike 4.0 International according to these terms

Version 1.0 - published on 01 Jun 2021 doi:10.25334/DP07-5Q37 - cite this

Adapted from: Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses v 5.0

Keywords

  1. phylogenetics
  2. bioinformatics
  3. sequencing
  4. FASTA
  5. NCBI
  6. NIBLSE
  7. algorithms
  8. BLAST
  9. multiple sequence alignment
  10. sequence similarity
  11. neighbor-joining distance matrix
  12. CourseSource
  13. phylogram
  14. percent identity matrix

Alignments

  1. Resource Type
  2. Audience Level
  3. Activity Length
  4. NIBLSE Core Competencies
  5. NIBLSE Status
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Versions

Version Released DOI Handle Status
1.0 Jun 01, 2021 10.25334/DP07-5Q37 published view version »