The NIBLSE community is coordinating an effort to collect, customize, and disseminate high quality bioinformatics learning resources. The current collection is displayed in two formats (table and card) below. All learning resources have been reviewed and assigned NIBLSE Core Competencies. To see a full description, click the competency or visit the NIBLSE Core Competency page.

Click the icon to download a guide on navigating QUBES tables:

 guide to qubes database thumbnail

 Browse the Collection by Card

C1. Role of Bioinformatics     C2. Computational Concepts     C3. Statistical Concepts     C4. Bioinformatics Tools 

C5. Data Retrieval     C6. Model     C7. Scripting     C8. Data Types     C9. Implications     

C1

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019

Leaping Lemur Life History

Cindy Bennington

Version: 1.0

This interrupted case study is intended for use in lower-division biology or ecology courses to complement the SimUText (SimBio) Life History chapter. Students practice calculating life history parameters and interpreting life history data.
modeling, simulation, module, Evolution, case study, data in the classroom, curriculum, agent-based model, quantitative biology, population model, interdisciplinary, bioinformatics, microbiology, Biodiversity, trade-offs, demonstration, in-class activity, physics, biology education, natural history collection, interdisciplinary education, HIV, Amphibans and Reptiles, C1. Role of bioinformatics, C3. Statistical concepts, CourseSource, multiplicity of infection, Poisson Distribution, Software, Website, introductory, Lab, Presentation, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Majors, Less than 1 hour, Conference material
73
49
0
06.20.2019
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.
phylogenetics, bioinformatics, sequencing, FASTA, NCBI, plant biology, NIBLSE, algorithms, incubators, Plant and Fungal Evolution, BLAST, multiple sequence alignment, CourseSource, phylogram, introductory, Lab, Teaching material, Undergraduate, Advanced, Majors, More than 1 hour, C1. Role of bioinformatics, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
84
49
0
05.29.2019

Population Demography in Swirl

Emily Weigel

Version: 1.0

The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
assessment, data science, natural history, Concept inventories, bioinformatics, synthetic biology, concept inventory, gene regulation, natural history collections, microRNAs, gene expression, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, 5th Life Discovery Conference, Website, introductory, Lab, Presentation, Online course, Teaching material, Reference material, Abstract, Undergraduate, Homework, Advanced, Majors, More than 1 hour, Extended Project, Conference material, Workshop material
93
29
0
05.15.2019
Workshop presented at the 2019 Biology Learning Community Conference
statistics, simulation, videos, module, randomization, textbook, curriculum, labs, problem sets, lecture slides, Quantitative reasoning, behavior, course, in-class activity, lab protocol, problem set, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, drosophila, genetic basis, fruit flies, introductory, Book, Lab, Presentation, Online course, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Majors, More than 1 hour, Conference material
142
2
0
02.21.2019
In this four- part guided activity, students will learn about the structure and function of human autosomal and sex chromosomes, view and interpret gene maps, and gain familiarity with basic bioinformatics resources and data through use of the National Ce
twitter, primary literature, linguistics, OER, bioinformatics, CREATE, journal articles, Summer Workshop 2018, CourseSource, autosome, homologous chromosomes, homologous recombination, sex chromosome, sex determination, sex reversal mutations, introductory, Article, Lab, Presentation, Online course, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Dataset, Publication, Faculty, Cleaned, Majors, 1 Hour, More than 1 hour, Conference material, Workshop material, C1. Role of bioinformatics, C4. Bioinformatics tools
87
19
0
01.04.2019
Modules showing how the NCBI database classifies and organizes information on DNA sequences, evolutionary relationships, and scientific publications. And a module working to identify a nucleotide sequence from an insect endosymbiont by using BLAST
graphing, data visualization, NCBI, DNA, BLAST, breast cancer, DCIS, histograms, centroid, sums of squares, nucleotide sequencing, introductory, Lab, Presentation, Teaching material, High School, Undergraduate, Advanced, Less than 1 hour, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval
128
34
0
01.03.2019

Bioinformatics: CpG Islands

Edward Himelblau

Version: 1.0

This is an introductory bioinformatics exercise intended for use in a genetics course.
genetics, epigenetics, ecology, database, Lab, bioinformatics, Ecological Society of America, fmn, Teaching material, Lecture, mapping, Undergraduate, workflow, NIBLSE, summer workshop, Data Discovery, Galaxy, cpg, genome database, RNAseq, gene expression, Advanced, More than 1 hour, Extended Project, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C5. Data retrieval
317
47
0
10.17.2017

Back to top of cards


C2

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of bioinformatics tools and concepts.
module, linear regression, case study, Measurement, climate data, moving averages, bioinformatics, sequencing, FASTA, Algebra, genomics, NCBI, in-class activity, Secondary, Developmental Biology, NIBLSE, algorithms, Worksheet, transcription, Lesson Plan, BLAST, multiple sequence alignment, Introduction to Modeling, Probability & Statistics, Primary, Post-secondary, Upper Primary, Grade 5, Middle School, Lower Division, Possible Tasks, Accuracy, Compare, Estimate, Evaluate, Infer, Quantify, CourseSource, exon, intron, splicing, voting, proportional reasoning, myostatin, muscle, DNA mutation, introductory, Study guide, Lab, Teaching material, Lecture, Reference material, Undergraduate, Dataset, Homework, Cleaned, Advanced, Majors, Non-majors, 1 Hour, More than 1 hour, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
73
115
0
06.19.2019
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.
phylogenetics, bioinformatics, sequencing, FASTA, NCBI, plant biology, NIBLSE, algorithms, incubators, Plant and Fungal Evolution, BLAST, multiple sequence alignment, CourseSource, phylogram, introductory, Lab, Teaching material, Undergraduate, Advanced, Majors, More than 1 hour, C1. Role of bioinformatics, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
84
49
0
05.29.2019
This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.
statistics, videos, phylogenetics, faculty mentoring networks, R, curriculum, hypothesis testing, data visualization, data science, online learning, course, bioinformatics, Ebola, Biodiversity, sequencing, FASTA, machine learning, python, NCBI, lab protocol, Communities of Practice, NIBLSE, algorithms, incubators, BLAST, multiple sequence alignment, geology, urbanization, guided inquiry, land use, productivity hypothesis, ecosystem stress hypothesis, intermediate disturbance hypothesis, Science Forward, proxies, scientific law, CourseSource, phylogram, Tutorial, introductory, Lab, Poster, Online course, Teaching material, Lecture, High School, Reference material, Reference sheet, Abstract, Undergraduate, Dataset, Faculty, Cleaned, Graduate, Advanced, Majors, Non-majors, Less than 1 hour, More than 1 hour, Conference material, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Adapted at NIBLSE
170
154
0
05.16.2019

Bioinformatics: CpG Islands

Edward Himelblau

Version: 1.0

This is an introductory bioinformatics exercise intended for use in a genetics course.
genetics, epigenetics, ecology, database, Lab, bioinformatics, Ecological Society of America, fmn, Teaching material, Lecture, mapping, Undergraduate, workflow, NIBLSE, summer workshop, Data Discovery, Galaxy, cpg, genome database, RNAseq, gene expression, Advanced, More than 1 hour, Extended Project, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C5. Data retrieval
317
47
0
10.17.2017

Back to top of cards


C3

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019

Leaping Lemur Life History

Cindy Bennington

Version: 1.0

This interrupted case study is intended for use in lower-division biology or ecology courses to complement the SimUText (SimBio) Life History chapter. Students practice calculating life history parameters and interpreting life history data.
modeling, simulation, module, Evolution, case study, data in the classroom, curriculum, agent-based model, quantitative biology, population model, interdisciplinary, bioinformatics, microbiology, Biodiversity, trade-offs, demonstration, in-class activity, physics, biology education, natural history collection, interdisciplinary education, HIV, Amphibans and Reptiles, C1. Role of bioinformatics, C3. Statistical concepts, CourseSource, multiplicity of infection, Poisson Distribution, Software, Website, introductory, Lab, Presentation, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Majors, Less than 1 hour, Conference material
73
49
0
06.20.2019
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of bioinformatics tools and concepts.
module, linear regression, case study, Measurement, climate data, moving averages, bioinformatics, sequencing, FASTA, Algebra, genomics, NCBI, in-class activity, Secondary, Developmental Biology, NIBLSE, algorithms, Worksheet, transcription, Lesson Plan, BLAST, multiple sequence alignment, Introduction to Modeling, Probability & Statistics, Primary, Post-secondary, Upper Primary, Grade 5, Middle School, Lower Division, Possible Tasks, Accuracy, Compare, Estimate, Evaluate, Infer, Quantify, CourseSource, exon, intron, splicing, voting, proportional reasoning, myostatin, muscle, DNA mutation, introductory, Study guide, Lab, Teaching material, Lecture, Reference material, Undergraduate, Dataset, Homework, Cleaned, Advanced, Majors, Non-majors, 1 Hour, More than 1 hour, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
73
115
0
06.19.2019

Finding Selection in All the Right Places

Juliet F. K. Noor, Mohamed A. F. Noor

Version: 1.0

Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource
genetics, mathematical model, computational model, agent-based model, bioinformatics, sequencing, high-throughput, high-content microscopy, Allen Cell Explorer, Allen Institute, introductory, Lab, Online course, Teaching material, Lecture, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, More than 1 hour, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval
90
18
0
01.03.2019

Bioinformatics: CpG Islands

Edward Himelblau

Version: 1.0

This is an introductory bioinformatics exercise intended for use in a genetics course.
genetics, epigenetics, ecology, database, Lab, bioinformatics, Ecological Society of America, fmn, Teaching material, Lecture, mapping, Undergraduate, workflow, NIBLSE, summer workshop, Data Discovery, Galaxy, cpg, genome database, RNAseq, gene expression, Advanced, More than 1 hour, Extended Project, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C5. Data retrieval
317
47
0
10.17.2017

Back to top of cards


C4

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of bioinformatics tools and concepts.
module, linear regression, case study, Measurement, climate data, moving averages, bioinformatics, sequencing, FASTA, Algebra, genomics, NCBI, in-class activity, Secondary, Developmental Biology, NIBLSE, algorithms, Worksheet, transcription, Lesson Plan, BLAST, multiple sequence alignment, Introduction to Modeling, Probability & Statistics, Primary, Post-secondary, Upper Primary, Grade 5, Middle School, Lower Division, Possible Tasks, Accuracy, Compare, Estimate, Evaluate, Infer, Quantify, CourseSource, exon, intron, splicing, voting, proportional reasoning, myostatin, muscle, DNA mutation, introductory, Study guide, Lab, Teaching material, Lecture, Reference material, Undergraduate, Dataset, Homework, Cleaned, Advanced, Majors, Non-majors, 1 Hour, More than 1 hour, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
73
115
0
06.19.2019

Frayer model growth mindset

Heather McGray

Version: 1.0

A Frayer model worksheet for the concept of growth mindset.
forest ecology, ecology, climate change, carbon, Plant Ecology, data management, Bioinformatics Education, spreadsheets, Bioinformatics and Genomics, Community Dynamics, NEON, Biogeochemistry, diversity, DIG, carbon cycling, National Ecological Observatory Network, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, Functions, C4. Bioinformatics tools, C5. Data retrieval, C6. Models, C8. Data types, C9. Implications, Recommended by NIBLSE, OpenStax, biomass, diversity index, Frayer model, introductory, Lab, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project
58
17
0
06.01.2019
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.
phylogenetics, bioinformatics, sequencing, FASTA, NCBI, plant biology, NIBLSE, algorithms, incubators, Plant and Fungal Evolution, BLAST, multiple sequence alignment, CourseSource, phylogram, introductory, Lab, Teaching material, Undergraduate, Advanced, Majors, More than 1 hour, C1. Role of bioinformatics, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
84
49
0
05.29.2019
This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.
statistics, videos, phylogenetics, faculty mentoring networks, R, curriculum, hypothesis testing, data visualization, data science, online learning, course, bioinformatics, Ebola, Biodiversity, sequencing, FASTA, machine learning, python, NCBI, lab protocol, Communities of Practice, NIBLSE, algorithms, incubators, BLAST, multiple sequence alignment, geology, urbanization, guided inquiry, land use, productivity hypothesis, ecosystem stress hypothesis, intermediate disturbance hypothesis, Science Forward, proxies, scientific law, CourseSource, phylogram, Tutorial, introductory, Lab, Poster, Online course, Teaching material, Lecture, High School, Reference material, Reference sheet, Abstract, Undergraduate, Dataset, Faculty, Cleaned, Graduate, Advanced, Majors, Non-majors, Less than 1 hour, More than 1 hour, Conference material, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Adapted at NIBLSE
170
154
0
05.16.2019

Population Demography in Swirl

Emily Weigel

Version: 1.0

The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
assessment, data science, natural history, Concept inventories, bioinformatics, synthetic biology, concept inventory, gene regulation, natural history collections, microRNAs, gene expression, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, 5th Life Discovery Conference, Website, introductory, Lab, Presentation, Online course, Teaching material, Reference material, Abstract, Undergraduate, Homework, Advanced, Majors, More than 1 hour, Extended Project, Conference material, Workshop material
93
29
0
05.15.2019

Species Range Over Space and Time

Debra Linton, Anna Monfils, Libby Ellwood, Molly Phillips

Version: 1.0

In this module, students use data from natural history collections to look at range shifts related to climate variables over different time periods.
simulation, videos, module, R, case study, data in the classroom, graphs, digital resources, course, climate change, bioinformatics, Biodiversity, plants, project, solutions, Protein Structure, math attitudes, natural history collection, genotype, phenotype, trophic cascades, national parks, Resources @ BIOMAAP, Interpreting Graphs, C4. Bioinformatics tools, C5. Data retrieval, Science Forward, CourseSource, computational modeling, Figure of the Day, central dogma, plant leaf structure, Website, introductory, Lab, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Dataset, Homework, Cleaned, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Workshop material
139
51
0
03.19.2019

Liberating Data for Biodiversity Research

Libby Ellwood, Austin Mast

Version: 1.0

The objectives of this exercise are to familiarize you with the information content of biodiversity specimens and their labels, the breadth of that information across geographic space and/or time.
case study, Resources @ NSF - NCCSTS, bioinformatics, HIV, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications, nucleotide sequencing, phylogenetic tree, viral life cycles, mutation rates, reverse transcriptase sequences, Lab, Teaching material, Undergraduate, Advanced, More than 1 hour
110
37
0
03.19.2019
Workshop presented at the 2019 Biology Learning Community Conference
statistics, simulation, videos, module, randomization, textbook, curriculum, labs, problem sets, lecture slides, Quantitative reasoning, behavior, course, in-class activity, lab protocol, problem set, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, drosophila, genetic basis, fruit flies, introductory, Book, Lab, Presentation, Online course, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Majors, More than 1 hour, Conference material
142
2
0
02.21.2019
In this four- part guided activity, students will learn about the structure and function of human autosomal and sex chromosomes, view and interpret gene maps, and gain familiarity with basic bioinformatics resources and data through use of the National Ce
twitter, primary literature, linguistics, OER, bioinformatics, CREATE, journal articles, Summer Workshop 2018, CourseSource, autosome, homologous chromosomes, homologous recombination, sex chromosome, sex determination, sex reversal mutations, introductory, Article, Lab, Presentation, Online course, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Dataset, Publication, Faculty, Cleaned, Majors, 1 Hour, More than 1 hour, Conference material, Workshop material, C1. Role of bioinformatics, C4. Bioinformatics tools
87
19
0
01.04.2019

Finding Selection in All the Right Places

Juliet F. K. Noor, Mohamed A. F. Noor

Version: 1.0

Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource
genetics, mathematical model, computational model, agent-based model, bioinformatics, sequencing, high-throughput, high-content microscopy, Allen Cell Explorer, Allen Institute, introductory, Lab, Online course, Teaching material, Lecture, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, More than 1 hour, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval
90
18
0
01.03.2019
Modules showing how the NCBI database classifies and organizes information on DNA sequences, evolutionary relationships, and scientific publications. And a module working to identify a nucleotide sequence from an insect endosymbiont by using BLAST
graphing, data visualization, NCBI, DNA, BLAST, breast cancer, DCIS, histograms, centroid, sums of squares, nucleotide sequencing, introductory, Lab, Presentation, Teaching material, High School, Undergraduate, Advanced, Less than 1 hour, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval
128
34
0
01.03.2019

The Ames Test

Nathan Goodson-Gregg, Elizabeth A. De Stasio

Version: 1.0

Introduction to the Ames Test, published as GSA Learning Resource
genetics, DNA, ames test, assay, Lab, Teaching material, Undergraduate, Advanced, Extended Project, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types
116
20
0
01.03.2019

BSL-4: Authorized Personnel Only

Nicole Anthony

Version: 1.0

National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection
QUBES, faculty mentoring networks, infectious disease, experimental design, bioinformatics, community, Ebola, Case It!, PCR, BLAST, multiple sequence alignment, Summer Workshop 2018, Published in National Center for Case Study Teaching in Science, polymerase chain reaction, febrile illness, virus, ELISA, enzyme linked immunosorbent assay, filovirus, Africa, introductory, Poster, Teaching material, Lecture, High School, Reference material, Undergraduate, Majors, Non-majors, Extended Project, Workshop material, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications
235
35
0
09.24.2018

Back to top of cards


C5

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of bioinformatics tools and concepts.
module, linear regression, case study, Measurement, climate data, moving averages, bioinformatics, sequencing, FASTA, Algebra, genomics, NCBI, in-class activity, Secondary, Developmental Biology, NIBLSE, algorithms, Worksheet, transcription, Lesson Plan, BLAST, multiple sequence alignment, Introduction to Modeling, Probability & Statistics, Primary, Post-secondary, Upper Primary, Grade 5, Middle School, Lower Division, Possible Tasks, Accuracy, Compare, Estimate, Evaluate, Infer, Quantify, CourseSource, exon, intron, splicing, voting, proportional reasoning, myostatin, muscle, DNA mutation, introductory, Study guide, Lab, Teaching material, Lecture, Reference material, Undergraduate, Dataset, Homework, Cleaned, Advanced, Majors, Non-majors, 1 Hour, More than 1 hour, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
73
115
0
06.19.2019

Frayer model growth mindset

Heather McGray

Version: 1.0

A Frayer model worksheet for the concept of growth mindset.
forest ecology, ecology, climate change, carbon, Plant Ecology, data management, Bioinformatics Education, spreadsheets, Bioinformatics and Genomics, Community Dynamics, NEON, Biogeochemistry, diversity, DIG, carbon cycling, National Ecological Observatory Network, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, Functions, C4. Bioinformatics tools, C5. Data retrieval, C6. Models, C8. Data types, C9. Implications, Recommended by NIBLSE, OpenStax, biomass, diversity index, Frayer model, introductory, Lab, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project
58
17
0
06.01.2019
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.
phylogenetics, bioinformatics, sequencing, FASTA, NCBI, plant biology, NIBLSE, algorithms, incubators, Plant and Fungal Evolution, BLAST, multiple sequence alignment, CourseSource, phylogram, introductory, Lab, Teaching material, Undergraduate, Advanced, Majors, More than 1 hour, C1. Role of bioinformatics, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
84
49
0
05.29.2019
This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.
statistics, videos, phylogenetics, faculty mentoring networks, R, curriculum, hypothesis testing, data visualization, data science, online learning, course, bioinformatics, Ebola, Biodiversity, sequencing, FASTA, machine learning, python, NCBI, lab protocol, Communities of Practice, NIBLSE, algorithms, incubators, BLAST, multiple sequence alignment, geology, urbanization, guided inquiry, land use, productivity hypothesis, ecosystem stress hypothesis, intermediate disturbance hypothesis, Science Forward, proxies, scientific law, CourseSource, phylogram, Tutorial, introductory, Lab, Poster, Online course, Teaching material, Lecture, High School, Reference material, Reference sheet, Abstract, Undergraduate, Dataset, Faculty, Cleaned, Graduate, Advanced, Majors, Non-majors, Less than 1 hour, More than 1 hour, Conference material, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Adapted at NIBLSE
170
154
0
05.16.2019

Population Demography in Swirl

Emily Weigel

Version: 1.0

The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
assessment, data science, natural history, Concept inventories, bioinformatics, synthetic biology, concept inventory, gene regulation, natural history collections, microRNAs, gene expression, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, 5th Life Discovery Conference, Website, introductory, Lab, Presentation, Online course, Teaching material, Reference material, Abstract, Undergraduate, Homework, Advanced, Majors, More than 1 hour, Extended Project, Conference material, Workshop material
93
29
0
05.15.2019

Species Range Over Space and Time

Debra Linton, Anna Monfils, Libby Ellwood, Molly Phillips

Version: 1.0

In this module, students use data from natural history collections to look at range shifts related to climate variables over different time periods.
simulation, videos, module, R, case study, data in the classroom, graphs, digital resources, course, climate change, bioinformatics, Biodiversity, plants, project, solutions, Protein Structure, math attitudes, natural history collection, genotype, phenotype, trophic cascades, national parks, Resources @ BIOMAAP, Interpreting Graphs, C4. Bioinformatics tools, C5. Data retrieval, Science Forward, CourseSource, computational modeling, Figure of the Day, central dogma, plant leaf structure, Website, introductory, Lab, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Dataset, Homework, Cleaned, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Workshop material
139
51
0
03.19.2019

Liberating Data for Biodiversity Research

Libby Ellwood, Austin Mast

Version: 1.0

The objectives of this exercise are to familiarize you with the information content of biodiversity specimens and their labels, the breadth of that information across geographic space and/or time.
case study, Resources @ NSF - NCCSTS, bioinformatics, HIV, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications, nucleotide sequencing, phylogenetic tree, viral life cycles, mutation rates, reverse transcriptase sequences, Lab, Teaching material, Undergraduate, Advanced, More than 1 hour
110
37
0
03.19.2019
Workshop presented at the 2019 Biology Learning Community Conference
statistics, simulation, videos, module, randomization, textbook, curriculum, labs, problem sets, lecture slides, Quantitative reasoning, behavior, course, in-class activity, lab protocol, problem set, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, drosophila, genetic basis, fruit flies, introductory, Book, Lab, Presentation, Online course, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Majors, More than 1 hour, Conference material
142
2
0
02.21.2019

Finding Selection in All the Right Places

Juliet F. K. Noor, Mohamed A. F. Noor

Version: 1.0

Lab introducing students to evolutionary genetics using bioinformatics and biocuration, published as GSA Learning Resource
genetics, mathematical model, computational model, agent-based model, bioinformatics, sequencing, high-throughput, high-content microscopy, Allen Cell Explorer, Allen Institute, introductory, Lab, Online course, Teaching material, Lecture, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, More than 1 hour, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval
90
18
0
01.03.2019
To increase students' interest in their own genomes, this computer-based laboratory lesson is designed to be coupled with the opportunity for the students to be genotyped by the consumer sequencing company, 23andMe. Published in CourseSource
bioinformatics, CourseSource, genomic wide association studies, UCSC genome browser, single nucleotide polymorphism, Lab, Teaching material, Undergraduate, Advanced, More than 1 hour, C5. Data retrieval, C9. Implications
106
23
0
01.03.2019
Modules showing how the NCBI database classifies and organizes information on DNA sequences, evolutionary relationships, and scientific publications. And a module working to identify a nucleotide sequence from an insect endosymbiont by using BLAST
graphing, data visualization, NCBI, DNA, BLAST, breast cancer, DCIS, histograms, centroid, sums of squares, nucleotide sequencing, introductory, Lab, Presentation, Teaching material, High School, Undergraduate, Advanced, Less than 1 hour, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval
128
34
0
01.03.2019

The Ames Test

Nathan Goodson-Gregg, Elizabeth A. De Stasio

Version: 1.0

Introduction to the Ames Test, published as GSA Learning Resource
genetics, DNA, ames test, assay, Lab, Teaching material, Undergraduate, Advanced, Extended Project, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types
116
20
0
01.03.2019

BSL-4: Authorized Personnel Only

Nicole Anthony

Version: 1.0

National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection
QUBES, faculty mentoring networks, infectious disease, experimental design, bioinformatics, community, Ebola, Case It!, PCR, BLAST, multiple sequence alignment, Summer Workshop 2018, Published in National Center for Case Study Teaching in Science, polymerase chain reaction, febrile illness, virus, ELISA, enzyme linked immunosorbent assay, filovirus, Africa, introductory, Poster, Teaching material, Lecture, High School, Reference material, Undergraduate, Majors, Non-majors, Extended Project, Workshop material, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications
235
35
0
09.24.2018

Bioinformatics: CpG Islands

Edward Himelblau

Version: 1.0

This is an introductory bioinformatics exercise intended for use in a genetics course.
genetics, epigenetics, ecology, database, Lab, bioinformatics, Ecological Society of America, fmn, Teaching material, Lecture, mapping, Undergraduate, workflow, NIBLSE, summer workshop, Data Discovery, Galaxy, cpg, genome database, RNAseq, gene expression, Advanced, More than 1 hour, Extended Project, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C5. Data retrieval
317
47
0
10.17.2017

Back to top of cards


C6

Frayer model growth mindset

Heather McGray

Version: 1.0

A Frayer model worksheet for the concept of growth mindset.
forest ecology, ecology, climate change, carbon, Plant Ecology, data management, Bioinformatics Education, spreadsheets, Bioinformatics and Genomics, Community Dynamics, NEON, Biogeochemistry, diversity, DIG, carbon cycling, National Ecological Observatory Network, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, Functions, C4. Bioinformatics tools, C5. Data retrieval, C6. Models, C8. Data types, C9. Implications, Recommended by NIBLSE, OpenStax, biomass, diversity index, Frayer model, introductory, Lab, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project
58
17
0
06.01.2019

Back to top of cards


C7

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019

Exploring Data with BISON

Erica Krimmel

Version: 1.0

A module to explore aggregated observation and collection information, through BISON, or Biodiversity Information Serving Our Nation (https://bison.usgs.gov), a tool for visualizing GBIF data.
epidemiology, differential equations, Querying databases, mathematical model, R, ecology, data in the classroom, differential equation model, ordinary differential equation model, neuroscience, excitable, plant biology, biodiversity informatics, natural history collections, plant pathology, C7. Scripting, Software, introductory, Lab, Online course, Teaching material, Lecture, Reference material, Undergraduate, Publication, Homework, Less than 1 hour
145
38
0
03.14.2019

Introduction to UNIX command line

Serghei Mangul

Version: 1.0

These are materials for a Unix workshop with hands-on examples that requires no prior knowledge of Unix or programming.
NIBLSE, command line, UNIX, grep, sed, basic UNIX commands, bash script, introductory, Lab, Online course, Teaching material, Lecture, High School, Undergraduate, Majors, Non-majors, More than 1 hour, C7. Scripting, Reviewed at NIBLSE
358
66
0
07.31.2018

Back to top of cards


C8

Biodiversity Literacy in Undergraduate Education (BLUE): Building standards and resources for using collections data in the classroom

Molly Phillips, Debra Linton, Libby Ellwood, Natalie Douglas, Lisa White, Anna Monfils

Version: 1.0

Abstract for poster on using collections data presented at the 2019 BioQUEST & QUBES Summer Workshop
cyberinfrastructure, statistics, videos, Evolution, data science, mathematical modeling, course, bioinformatics, human locomotion, neuroanatomy, neurophysiology, signal transduction, gene sequence analysis, NIBLSE, Bioinformatics Education, Bioinformatics and Genomics, incubators, natural history collections, Natural Selection, RNAseq, gene expression, C1. Role of bioinformatics, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C7. Scripting, C8. Data types, Science Forward, microbes, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, computer programming, education gateway, BLUE, introductory, Lab, Poster, Presentation, Online course, Teaching material, Lecture, High School, Reference material, Abstract, Undergraduate, Homework, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project, Conference material, Workshop material
58
9
0
06.26.2019
This exercise leads upper level biology majors in an inquiry-based excursion to determine how similar the signaling molecule, myostatin, is between humans and mice, using a basic set of bioinformatics tools and concepts.
module, linear regression, case study, Measurement, climate data, moving averages, bioinformatics, sequencing, FASTA, Algebra, genomics, NCBI, in-class activity, Secondary, Developmental Biology, NIBLSE, algorithms, Worksheet, transcription, Lesson Plan, BLAST, multiple sequence alignment, Introduction to Modeling, Probability & Statistics, Primary, Post-secondary, Upper Primary, Grade 5, Middle School, Lower Division, Possible Tasks, Accuracy, Compare, Estimate, Evaluate, Infer, Quantify, CourseSource, exon, intron, splicing, voting, proportional reasoning, myostatin, muscle, DNA mutation, introductory, Study guide, Lab, Teaching material, Lecture, Reference material, Undergraduate, Dataset, Homework, Cleaned, Advanced, Majors, Non-majors, 1 Hour, More than 1 hour, C2. Computational concepts, C3. Statistical concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
73
115
0
06.19.2019

Frayer model growth mindset

Heather McGray

Version: 1.0

A Frayer model worksheet for the concept of growth mindset.
forest ecology, ecology, climate change, carbon, Plant Ecology, data management, Bioinformatics Education, spreadsheets, Bioinformatics and Genomics, Community Dynamics, NEON, Biogeochemistry, diversity, DIG, carbon cycling, National Ecological Observatory Network, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, Functions, C4. Bioinformatics tools, C5. Data retrieval, C6. Models, C8. Data types, C9. Implications, Recommended by NIBLSE, OpenStax, biomass, diversity index, Frayer model, introductory, Lab, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project
58
17
0
06.01.2019
This laboratory module is a modification of the original published on CourseSource with a focus on plant biology. In the final activity, students conduct a BLAST to compare histone protein sequences between Arabidopsis, moss and yeast.
phylogenetics, bioinformatics, sequencing, FASTA, NCBI, plant biology, NIBLSE, algorithms, incubators, Plant and Fungal Evolution, BLAST, multiple sequence alignment, CourseSource, phylogram, introductory, Lab, Teaching material, Undergraduate, Advanced, Majors, More than 1 hour, C1. Role of bioinformatics, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Incubated at NIBLSE
84
49
0
05.29.2019
This adaptation of the sequence similarity resource provides biology students with a basic set of bioinformatics concepts and tools. These concepts and tools are used to explore relationships between Ebola virus strains.
statistics, videos, phylogenetics, faculty mentoring networks, R, curriculum, hypothesis testing, data visualization, data science, online learning, course, bioinformatics, Ebola, Biodiversity, sequencing, FASTA, machine learning, python, NCBI, lab protocol, Communities of Practice, NIBLSE, algorithms, incubators, BLAST, multiple sequence alignment, geology, urbanization, guided inquiry, land use, productivity hypothesis, ecosystem stress hypothesis, intermediate disturbance hypothesis, Science Forward, proxies, scientific law, CourseSource, phylogram, Tutorial, introductory, Lab, Poster, Online course, Teaching material, Lecture, High School, Reference material, Reference sheet, Abstract, Undergraduate, Dataset, Faculty, Cleaned, Graduate, Advanced, Majors, Non-majors, Less than 1 hour, More than 1 hour, Conference material, C2. Computational concepts, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, Adapted at NIBLSE
170
154
0
05.16.2019

Population Demography in Swirl

Emily Weigel

Version: 1.0

The students will learn to generate, test, and graphically represent basic hypotheses on data distributions using large datasets.
assessment, data science, natural history, Concept inventories, bioinformatics, synthetic biology, concept inventory, gene regulation, natural history collections, microRNAs, gene expression, C1. Role of bioinformatics, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types, CourseSource, 2019 QUBES/BioQUEST Summer Workshop, 5th Life Discovery Conference, Website, introductory, Lab, Presentation, Online course, Teaching material, Reference material, Abstract, Undergraduate, Homework, Advanced, Majors, More than 1 hour, Extended Project, Conference material, Workshop material
93
29
0
05.15.2019

The Ames Test

Nathan Goodson-Gregg, Elizabeth A. De Stasio

Version: 1.0

Introduction to the Ames Test, published as GSA Learning Resource
genetics, DNA, ames test, assay, Lab, Teaching material, Undergraduate, Advanced, Extended Project, C4. Bioinformatics tools, C5. Data retrieval, C8. Data types
116
20
0
01.03.2019

Back to top of cards


C9

Frayer model growth mindset

Heather McGray

Version: 1.0

A Frayer model worksheet for the concept of growth mindset.
forest ecology, ecology, climate change, carbon, Plant Ecology, data management, Bioinformatics Education, spreadsheets, Bioinformatics and Genomics, Community Dynamics, NEON, Biogeochemistry, diversity, DIG, carbon cycling, National Ecological Observatory Network, productivity, net ecosystem production, gross primary production, ecosystem respiration, carbon fluxes, Functions, C4. Bioinformatics tools, C5. Data retrieval, C6. Models, C8. Data types, C9. Implications, Recommended by NIBLSE, OpenStax, biomass, diversity index, Frayer model, introductory, Lab, Online course, Teaching material, Lecture, High School, Reference material, Undergraduate, Homework, Graduate, Advanced, Majors, Non-majors, 1 Hour, Less than 1 hour, More than 1 hour, Extended Project
58
17
0
06.01.2019

Liberating Data for Biodiversity Research

Libby Ellwood, Austin Mast

Version: 1.0

The objectives of this exercise are to familiarize you with the information content of biodiversity specimens and their labels, the breadth of that information across geographic space and/or time.
case study, Resources @ NSF - NCCSTS, bioinformatics, HIV, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications, nucleotide sequencing, phylogenetic tree, viral life cycles, mutation rates, reverse transcriptase sequences, Lab, Teaching material, Undergraduate, Advanced, More than 1 hour
110
37
0
03.19.2019

Genes and Civil Liberties

Philip L. Bereano

Version: 1.0

This lesson focuses on examining civil liberties issues as they relate to genetic research. Students can choose to represent an organization, real or fictional, that will report to a task force on civil liberties issues. Published in AIBS
genetics, statistics, module, plant physiology, botany, power, statistical power, sample size, effect size, statistical tests, laboratory, species richness, bioinformatics, bioethics, Biodiversity, plants, Island biogeography, evaluation, NISER, DNA, AIM-UP, mendelian inheritance, phenotype, cotelydon, corn, Wisconsin fast plants, transpiration, tomato, food security, program evaluation, ethics, Summer Workshop 2018, DNA profiling, DNA forensics, Software, Lab, Poster, Teaching material, Lecture, Reference material, Abstract, Undergraduate, Advanced, Extended Project, Workshop material, C9. Implications
68
13
0
01.04.2019
To increase students' interest in their own genomes, this computer-based laboratory lesson is designed to be coupled with the opportunity for the students to be genotyped by the consumer sequencing company, 23andMe. Published in CourseSource
bioinformatics, CourseSource, genomic wide association studies, UCSC genome browser, single nucleotide polymorphism, Lab, Teaching material, Undergraduate, Advanced, More than 1 hour, C5. Data retrieval, C9. Implications
106
23
0
01.03.2019

BSL-4: Authorized Personnel Only

Nicole Anthony

Version: 1.0

National Center for Case Study Teaching in Science resource on the 2014 Ebola epidemic. This resource is also included in the NIBLSE Learning Resource Collection
QUBES, faculty mentoring networks, infectious disease, experimental design, bioinformatics, community, Ebola, Case It!, PCR, BLAST, multiple sequence alignment, Summer Workshop 2018, Published in National Center for Case Study Teaching in Science, polymerase chain reaction, febrile illness, virus, ELISA, enzyme linked immunosorbent assay, filovirus, Africa, introductory, Poster, Teaching material, Lecture, High School, Reference material, Undergraduate, Majors, Non-majors, Extended Project, Workshop material, C4. Bioinformatics tools, C5. Data retrieval, C9. Implications
235
35
0
09.24.2018

Back to top of cards

 Browse the Collection by Table