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Sequence Similarity: Introducing Biological Databases to Community College Biology Students

Author(s): Jennifer Katcher

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Summary:
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

Licensed under CC Attribution-NonCommercial-ShareAlike 4.0 International according to these terms

Version 1.0 - published on 01 Jun 2021 doi:10.25334/1EAH-3E24 - cite this

Adapted from: Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses v 5.0

Keywords

  1. phylogenetics
  2. bioinformatics
  3. sequencing
  4. FASTA
  5. NCBI
  6. NIBLSE
  7. algorithms
  8. incubators
  9. BLAST
  10. multiple sequence alignment
  11. sequence similarity
  12. BLOSUM scoring matrix
  13. neighbor-joining distance matrix
  14. CourseSource
  15. phylogram
  16. Zika virus

Alignments

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  2. Audience Level
  3. Activity Length
  4. NIBLSE Core Competencies
  5. NIBLSE Status
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Versions

Version Released DOI Handle Status
1.0 Jun 01, 2021 10.25334/1EAH-3E24 published view version »