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Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

Author(s): Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3

1. Adams State University 2. Fairmont State University 3. North Carolina State University

4708 total view(s), 824 download(s)

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Adapt 8
Summary:
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

Licensed under CC Attribution-NonCommercial-ShareAlike 4.0 International according to these terms

Version 5.0 - published on 02 May 2019 doi:10.25334/Q4G45Z - cite this

Keywords

  1. phylogenetics
  2. bioinformatics
  3. sequencing
  4. FASTA
  5. NCBI
  6. NIBLSE
  7. algorithms
  8. incubators
  9. BLAST
  10. multiple sequence alignment
  11. sequence similarity
  12. BLOSUM scoring matrix
  13. neighbor-joining distance matrix
  14. CourseSource
  15. phylogram
  16. Zika virus

Alignments

  1. Resource Type
  2. Audience Level
  3. Activity Length
  4. NIBLSE Core Competencies
  5. NIBLSE Status
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Usage

Total Views

4,708

The above numbers reflect non-unique views of the page, which may include multiple views in the same day by the same user.

Total Downloads

824

The above numbers reflect non-unique user access to the linked content, which includes but is not limited to primary access button clicks, bundle downloads, and supporting documents.