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Sequence Similarity: An inquiry based and "under the hood" approach for incorporating molecular sequence alignment in introductory undergraduate biology courses

Author(s): Adam Kleinschmit1, Benita Brink1, Steven Roof2, Carlos Christopher Goller3, Sabrina Robertson3

1. Adams State University 2. Fairmont State University 3. North Carolina State University

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Adapt 8
Summary:
This laboratory module, published on CourseSource, leads introductory biology students in the exploration of a basic set of bioinformatics concepts and tools.

Licensed under CC Attribution-NonCommercial-ShareAlike 4.0 International according to these terms

Version 5.0 - published on 02 May 2019 doi:10.25334/Q4G45Z - cite this

Keywords

  1. phylogenetics
  2. bioinformatics
  3. sequencing
  4. FASTA
  5. NCBI
  6. NIBLSE
  7. algorithms
  8. incubators
  9. BLAST
  10. multiple sequence alignment
  11. sequence similarity
  12. BLOSUM scoring matrix
  13. neighbor-joining distance matrix
  14. CourseSource
  15. phylogram
  16. Zika virus

Alignments

  1. Resource Type
  2. Audience Level
  3. Activity Length
  4. NIBLSE Core Competencies
  5. NIBLSE Status
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Versions

Version Released DOI Handle Status
5.0 May 02, 2019 10.25334/Q4G45Z published view version »
4.0 Dec 04, 2018 10.25334/Q4VM1P published view version »
3.0 Jul 05, 2017 10.25334/Q4FH3P published view version »
2.0 Jun 05, 2017 N/A published view version »
1.0 Jan 31, 2017 N/A published view version »