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A Fun Introductory Command Line Exercise: Next Generation Sequencing Quality Analysis with Emoji!

By Rachael St. Jacques1, Max Maza1, Sabrina Robertson2, Guoqing Lu3, Andrew Lonsdale4, Ray A Enke5

1. Department of Biology, James Madison University 2. Department of Psychology & Neuroscience, University of North Carolina at Chapel Hill 3. Department of Biology and School of Interdisciplinary Informatics, University of Nebraska Omaha 4. ARC Centre of Excellence in Plant Cell Walls, Melbourne University 5. James Madison University

This resource is a fun computer-based intro to command line programming. The activity takes FASTQ NGS data files and runs a fun program called FASTQE.

Listed in Teaching Materials | resource by group NIBLSE Incubator: Intro to Command Line Coding Genomics Analysis

Download (DOCX)

Version 1.0 - published on 28 Feb 2019 doi:10.25334/Q4P733 - cite this Last public release: 2.0

Licensed under CC Attribution-ShareAlike 4.0 International according to these terms


Version Released DOI Handle Status
2.0 Jun 07, 2019 10.25334/Q4D172 published view version »
1.0 Feb 28, 2019 10.25334/Q4P733 published view version »

NIBLSE Incubator: Intro to Command Line Coding Genomics Analysis

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