Resources
Introduction to UNIX command line
Author(s): Serghei Mangul1, Kristen Butela2, Michael Sierk3, Lihua Stefan
1. University of California - Los Angeles 2. University of Pittsburgh 3. Saint Vincent College
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- BWA_Tutorial.zip(ZIP | 71 MB)
- Intro to Unix Teaching Notes.docx(DOCX | 18 KB)
- Introduction to Unix.docx(DOCX | 266 KB)
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Description
This laboratory module leads undergraduate biology students in learning how to operate in a command-line environment. It is derived from a workshop given by the Institute for Quantitative and Computational Biosciences at UCLA, primarily to graduate students and research scientists with the need to learn how to process sequence data in a Unix environment. The materials from that three-day workshop are available here: https://github.com/QCB-Collaboratory/W1.UNIX.command.line/wiki. These materials can be used as background for the Instructor and/or students, or as an extension of this exercise.
Notes
This version includes extensive teaching notes, clarified learning outcomes, and more student-centered, inquiry focused pedagogical strategies. The material was also adapted to fit in one three-hour laboratory period.
Cite this work
Researchers should cite this work as follows:
- Serghei Mangul, Butela, K., Sierk, M., Stefan, L. (2020). Introduction to UNIX command line. NIBLSE Incubator: Introduction to UNIX command line, (Version 2.0). QUBES Educational Resources. doi:10.25334/H7TG-G648