CourseSource: Resources

Essay

1165

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145

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The BioTAP Professional Development Model: Expanding Empirical Research on Graduate Student Teaching Professional Development

The Biology Teaching Assistant Project (BioTAP) provides a year-long mentoring program for practitioners and researchers of Biology Graduate Teaching Assistant Teaching Professional Development (GTA TPD). The program participants, known as BioTAP...

Courses: Professional Development and Career Planning

mentoringstemcommunityUndergraduateteaching professional developmentGraduate Teaching AssistantConfidence in Research Skills

Essay

1317

views

188

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0

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Navigating Proposal Writing and Implementation of an NSF S-STEM Grant Program: Reflections as a First-Time PI

Recruitment and retention issues are an increasing concern to many institutions nationwide, most especially in regard to underrepresented minority (URM) students enrolled in STEM. It is, therefore, incumbent upon colleges and universities to...

Courses: Professional Development and Career Planning

Proposal writingGrant managementNSF S-STEM

Essay

808

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117

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0

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Resources for Assessing Educational Interventions in Biology at the Collegiate Level

Most scientific research is judged based on the quality of controlled experiments and carefully analyzed results. In addition, proper levels of regulation in terms of biosafety and animal usage are a routine part of the scientific research process...

Courses: Introductory Biology Professional Development and Career Planning

researchassessmentpedagogylearning gainsIRBregulatory compliance

Teaching Tools and Strategies

766

views

78

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0

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Biology from Molecules to Embryos, Interactive Animated Lessons

Visualizing kinetic processes can be an impediment to student mastery of basic science coursework. To remedy this obstacle, I created an educational program called Biology from Molecules to Embryos© (BioME), which provides 28 animated lessons...

Courses: Developmental Biology Genetics Introductory Biology

geneticsBIOMEEmbryologycomputer assisted instructioneducational programeducational videosonline lessonsanimated lessonseducational website

Essay

3212

views

80

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0

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A Multi-Institutional Alternative Assessment Faculty Learning Community: Supporting Teaching in Higher Education

Faculty learning communities (FLCs) provide opportunities for professional development for faculty, teaching staff, and educational developers in a collaborative and open environment. In this essay, we describe our experience organizing,...

Courses: Professional Development and Career Planning

professional developmentAlternative AssessmentFaculty Learning Community

Lesson

2504

views

406

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0

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An Introduction to Eukaryotic Genome Analysis in Non-model Species for Undergraduates: A tutorial from the Genome Consortium for Active Teaching

Advances in Next Generation Sequencing (NGS) technology have led to development of many research methods for analyzing genomic data. Students studying biology at the undergraduate level must hone their skills at genomic analysis to participate in...

Courses: Bioinformatics Genetics Science Process Skills

Speciationgenome evolutiongenetic variation

Essay

855

views

170

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0

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Strategies for developing a science communicator through authentic science writing assignments

To prepare biology undergraduates to be able to read and evaluate the primary literature, it is beneficial to teach students how to write documents in the style of professional science style manuscripts. By breaking manuscripts into individual...

Courses: Science Process Skills

communicationPeer reviewscience writing

Review

1773

views

109

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0

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Making Change Sustainable: Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE) Meeting Review

The purpose of the meeting described in this review was to decide how best to ensure the sustainability of the Network for Integrating Bioinformatics into Life Science Education (NIBLSE; pronounced “nibbles”). Biology research today...

Courses: Bioinformatics

meetingsustainabilityfmnNIBLSEincubator

Lesson

1636

views

294

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0

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Engaging Students in Pharmacogenetics: Patient Case Studies Using the PharmGKB Website

Cytochrome P450 (CYP) enzymes are important regulators of drug efficacy and toxicity. Genetic variation in CYP isoforms can impact how well patients respond to medications or experience unwanted toxicities. PharmGKB is an online pharmacogenomics...

Courses: Genetics Toxicology

toxicologyPharmacologydrug metabolismpharmacodynamicspharmacogenetics

Lesson

2518

views

104

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0

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Film as a Powerful Tool for Increasing Awareness of the Importance of Belonging in STEM

People of color in STEM fields can face a variety of challenges with belonging due to structural, cultural, psychological, and institutional barriers. The professional development sessions described in this lesson involved using film as well as...

Courses: Professional Development and Career Planning

steminclusionfilmbelonging

Lesson

3357

views

560

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0

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Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching

Next-generation sequencing is radically changing the study of biology, but there are currently few resources aimed at teaching the required laboratory and data-analysis skills to undergraduate students. This gap is especially true at primarily...

Courses: Bioinformatics Introductory Biology

statisticsbioinformaticsRNAseqgene expressioncomputer programming

Lesson

1412

views

287

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0

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Using QIIME to Interpret Environmental Microbial Communities in an Upper Level Metagenomics Course

Metagenomics is rapidly evolving due to advances in sequencing technologies and bioinformatics, but without proper training to interpret these datasets, student understanding remains limited. Aimed at undergraduate juniors and seniors and graduate...

Courses: Biochemistry and Molecular Biology Bioinformatics Ecology Ecology Microbiology Science Process Skills

microbiome

Lesson

1290

views

96

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0

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Introducing Immunology Research Literature to Understand B-cell Receptor Gene Expression

Immunology is relevant to our everyday lives, driving a need for more engaging and inclusive undergraduate immunology education. One way to engage a diverse group of learners is by teaching them how to read and interpret the scientific literature....

Courses: Immunology Science Process Skills

recombinationantibodyV(D)J recombinationB-cell receptorlymphocyte receptor

Lesson

1407

views

200

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0

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Modeling Strep Throat Detection, Infection, and Spread Using an SIR Model and the Vensim Simulation Software

The overarching goal of this lesson is to provide students with an opportunity to gain experience making and using biological models. Biological modeling can be used to investigate complex, real-world problems so that predictions can be made about...

Courses: Cell Biology Immunology Introductory Biology Microbiology

infectious diseasebiological modelingSIR model

Lesson

903

views

135

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0

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Outside the Norm: Using Public Ecology Database Information to Teach Biostatistics

Biology students’ understanding of statistics is incomplete due to poor integration of these two disciplines. In some cases, students fail to learn statistics at the undergraduate level due to poor student interest and cursory teaching of...

Courses: Ecology Ecology Introductory Biology Science Process Skills

biostatisticshypothesis testingexperimental design

Lesson

2902

views

429

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0

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Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems

In evolution classrooms, introducing and reinforcing the idea of genetic drift and random selection can be challenging, as can be reinforcing appropriate mental models of evolution. Agent-based models offer students the opportunity to conduct a...

Courses: Bioinformatics Ecology Ecology Evolution Science Process Skills

modelingEvolutionecologyagent-based modelingGenetic Driftenvironmental scienceNatural Selectioncompetitive coevolutionsimulation modelingevolutionary reasoning

Lesson

1830

views

267

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0

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A CURE-based approach to teaching genomics using mitochondrial genomes

There is an abundance (currently over 1016 DNA bases) of publicly available genetic sequence data and a dearth of trained genomicists to process and interpret it, necessitating more trained bioinformaticians with biological expertise. For...

Courses: Bioinformatics Genetics

proteinsMitochondrial GenomesNuclear GenomesrRNAtRNA

Lesson

1557

views

275

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0

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Using Gamification to Teach Undergraduate Students about Scientific Writing

Despite its importance, scientific writing is often deprioritized in undergraduate biology classes. Reasons include assumed prior knowledge, lack of class time, tedious grading, and the complexity and challenges associated with quality writing. To...

Courses: Science Process Skills

gamificationscientific writingE-LearningInstant FeedbackInteractive LearningReading Scientific PapersVIdeo/computer game

Lesson

5690

views

624

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0

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An Active Learning Workshop to Teach Active Learning Strategies

College instructors who learn how to teach actively at the beginning of their careers do not have to modify deeply set habits that rely on lectures. Instead, they develop their teaching while they learn evidence-based practices. We developed a...

Courses: Professional Development and Career Planning

professional developmentActive-learning strategiesjigsawthink-pair-sharePedagogical approachesGallery WalkSmall group discussionInclusive practices

Teaching Tools and Strategies

1119

views

144

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0

comments

Lateral Transfer Maps as a Metacognitive Tool in First Year STEM Courses

We introduce the Lateral Transfer Map (LTM), a tool for students to actively and visually explore the transfer of ideas, skills, and concepts across concurrent coursework. The LTM is an extension of a concept map, replacing interconnected concepts...

Courses: Professional Development and Career Planning Science Process Skills

concept mapmetacognitionfirst-year studenttransfer

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The BioTAP Professional Development Model: Expanding Empirical Research on Graduate Student Teaching Professional Development

Navigating Proposal Writing and Implementation of an NSF S-STEM Grant Program: Reflections as a First-Time PI

Resources for Assessing Educational Interventions in Biology at the Collegiate Level

Biology from Molecules to Embryos, Interactive Animated Lessons

A Multi-Institutional Alternative Assessment Faculty Learning Community: Supporting Teaching in Higher Education

An Introduction to Eukaryotic Genome Analysis in Non-model Species for Undergraduates: A tutorial from the Genome Consortium for Active Teaching

Strategies for developing a science communicator through authentic science writing assignments

Making Change Sustainable: Network for Integrating Bioinformatics into Life Sciences Education (NIBLSE) Meeting Review

Engaging Students in Pharmacogenetics: Patient Case Studies Using the PharmGKB Website

Film as a Powerful Tool for Increasing Awareness of the Importance of Belonging in STEM

Teaching RNAseq at Undergraduate Institutions: A tutorial and R package from the Genome Consortium for Active Teaching

Using QIIME to Interpret Environmental Microbial Communities in an Upper Level Metagenomics Course

Introducing Immunology Research Literature to Understand B-cell Receptor Gene Expression

Modeling Strep Throat Detection, Infection, and Spread Using an SIR Model and the Vensim Simulation Software

Outside the Norm: Using Public Ecology Database Information to Teach Biostatistics

Moths and Frogs and E. coli, Oh My!: Agent-based Modeling of Evolutionary Systems

A CURE-based approach to teaching genomics using mitochondrial genomes

Using Gamification to Teach Undergraduate Students about Scientific Writing

An Active Learning Workshop to Teach Active Learning Strategies

Lateral Transfer Maps as a Metacognitive Tool in First Year STEM Courses

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