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    Free Online Textbook
    98

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    36

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    2012-Brian_Ingalls-Mathematical_Modelling_in_Systems_Biology
    This text provides an introduction to dynamic mathematical modeling of cellular processes. The emphasis is on using computational tools to investigate models of cellular phenomena.
    biologygene regulatory networksModelsmetabolic networkssignal transduction pathwayselectrophysiology
    Article or Presentation
    134

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    58

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    1994-Brian_Winkel-Ant_Tunnels_and_Calculus
    A simple mathematical model describing the time it takes for an ant to construct a linear tunnel of length x is produced from five intuitively acceptable assumptions.
    differential equationsdifference equationfirst orderderivative definitionant tunnel
    Article or Presentation
    106

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    40

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    2009-Agnes_Rash-Brian_Winkel-Birth_and_Death_Process_Modeling_Leads_to_the_Poisson_Distribution
    In this paper there are details of development of the general birth and death process from which we can extract the Poisson process as a special case.
    ProbabilityMeanPoisson processbirth and death processinfinite number of differential equations
    Article or Presentation
    108

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    11

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    2013-Brian_Winkel-An_Optimal_Control_Model_in_Insect_Colonies
    we find and develop background material on an application of optimal control theory to model the evolutionary strategy of an insect colony to produce the maximum number of queen or reproducer insects in the colony at the end of a season.
    insect colonyoptimal controlparameter
    Article or Presentation
    111

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    36

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    1981-Nielsen_Francois-Rachel_Rosenfeld-Substantive_Interpretations_of_Differential_Equation_Models
    The interpretation of parameters of dynamic models is illustrated with reference to research on two substantive topics: political mobilization and intragenerational mobility.
    differential equationsdynamical systemsFirst order linearintragenerational mobilitypolitical mobilizationmobility
    Article or Presentation
    110

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    54

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    2004-Mark_McCartney-Using_second-order_ordinary_differential_equations_to_model_traffic_flow
    A simple mathematical model for how vehicles follow each other along a stretch of road is presented. The resulting linear second-order differential equation with constant coefficients is solved and interpreted.
    differential equationstraffic flowvehicle followsecond order
    Article or Presentation
    74

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    26

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    2012-R_B_Ogunrinde-J_Sunday-On_some_models_based_on_second_order_differential_equations
    This paper presents some models based on second order differential equations. This is a very straightforward article with good explanations of modeling assumptions.
    combatcombat modelspecies interaction
    Article or Presentation
    85

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    42

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    1992-Emelie_Kenney-Differential_equations_and_the_AIDS_epidemic
    This paper describes a lecture for Calculus II students in which the Acquired Immune Deficiency Syndrome was used to motivate study of first-order linear differential equations and the derivative as a rate of change.
    datafirst orderparameterAIDS
    Article or Presentation
    110

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    35

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    1988-Michael_Intriligator-Dagobert_Brito-A_Predator-Prey_Model_of_Guerrilla_Warfare
    The purpose of this paper is to analyze guerrilla warfare by means of a dynamic model. The model suggests specific paths for the evolution of such ward and how such wars might be fought or combatted.
    simulationguerilla warfarewarfarecombat
    Modeling Scenario
    175

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    132

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    1-035-DotseroVolcanoEruption-ModelingScenario
    In this scenario, we use Carbon-14 dating of the Dotsero volcano in Colorado as a way of emphasizing this multistage process of modeling.
    exponential decayhalf-lifedecayEuler's methodcarbon datingdecay rateCarbon-14Dotsero volcanovolcano
    Article or Presentation
    108

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    40

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    1994-T_Gruszka-A_Balloon_Experiment_in_the_Classroom
    The experiment consists of dropping a balloon from two different heights and recording the time it takes to hit the floor. The following experiment involves a balloon, a stopwatch, and a measurement device such as a meter stick.
    differential equationsresistancegravityfree fallaccelerationballoon
    Article or Presentation
    94

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    37

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    2001-A_Tsoularis-Analysis_of_logistic_growth_models
    The paper presents an historical development of the logistic equation in its various forms, including Verhulst, Pearl and Reed, Gompertz, Bertalanffy, Richards, and others.
    logisticpopulationgrowth curvelimited growthGompertzhistorylogistic equationVerhulstPearl and ReedBertalanffyRichards
    Article or Presentation
    120

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    32

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    1980-Peastrel-Lynch-Armenti-Terminal_velocity_of_a_shuttlecock_in_vertical_fall
    This paper offers a set of data on a falling shuttlecock (the moving object in badminton) in air. How the authors collected the data is described fully and can be replicated easily by modern equipment.
    parameter estimationdata collectionresistancefallingterminal velocityNewton's Second Law of Motionshuttlecock
    Article or Presentation
    195

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    44

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    2011-Lorelei_Koss-Sustainability_in_a_differential_equations_course_case_study_of_Easter_Island
    Easter Island is a fascinating example of resource depletion and population collapse, and its relatively short period of human habitation combined with its isolation lends itself well to investigation by students in an ordinary differential course.
    differential equationssustainabilitypopulationEaster Islandcollapseenvironmental collapse
    Article or Presentation
    144

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    42

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    2009-Brian_Winkel-Population_modelling_with_MandMs
    Several activities in which population dynamics can be modeled by tossing M&M’s® candy are presented.
    simulationparameter estimationimmigrationdeathdifference equation
    Article or Presentation
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    2002-Patrick_Nelson-Alan_Perelson-Mathematical_analysis_of_delay_differential _equation_models_of_HIV-1_infection
    Models of HIV-1 infection that include intracellular delays are more accurate representations of the biology and change the estimated values of kinetic parameters when compared to models without delays.
    delayHIV-1T cellscombination antiviral therapy
    Article or Presentation
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    38

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    2014-C_W_Groetsch-S_A_ Yost-Vertical Projection_in_a_Resisting_Medium_Revelations_on_Observations_of_Mersenne
    This article, inspired by a 17th-century woodcut, validates empirical observations of Marin Mersenne (1588–1648) on timing of vertically-launched projectiles for a general mathematical model of resistance.
    resistanceprojectile motionprojectilefluidMersenne
    Free Online Textbook
    129

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    59

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    2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
    I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can always access the current version.
    biologytextbooksystemsdyanmical system
    Potential Scenario
    109

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    44

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    2018-Dyjuan_Tatro-The_Mathematics_of_Cancer-Fitting_Gompertz_Equation_to_Tumor_Growth
    Fitting the Gompertz Model to long term breast cancer study data, this project ascertains gompertzian parameters that can be used to predicts tumor growth as a function of time.
    tumorgrowthGompertzfittingparameter
    Potential Scenario
    116

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    2018-Weber_Theers_Surmann_Ligges_Weihs-Sensitivity Analysis_of_Ordinary_Differential_Equation_Models
    This report will focus on the sensitivity analysis of ordinary differential equation (ODE) models since they can be used to model so-called Low Frequency Oscillations (LFOs).
    sensitivityregressionparameter estimationsystemlow frequency oscillationsoscillations