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Downloads
Views
Date
Relevance
Modeling Scenario
293
views
224
downloads
0
comments
1-108-PoissonProcess-ModelingScenario
In this project students learn to derive the probability density function (pdf) of the Poisson distribution and the cumulative distribution (cdf) of the waiting time. They will use them to solve problems in stochastic processes.
Probability
s
stochastic processes
Poisson process
waiting time
arrival
Modeling Scenario
318
views
236
downloads
0
comments
1-027-StochasticProcesses-ModelingScenario
We build the infinite set of first order differential equations for modeling a stochastic process, the so-called birth and death equations. We will only need to use integrating factor solution strategy or DSolve in Mathematica for success.
Variance
Mean
stochastic
random
operations research
industrial engineering
Poisson process
traffic
Potential Scenario
130
views
57
downloads
0
comments
2007-Choisy-Guégan-Rohani-Mathematical Modeling of Infectious Diseases Dynamics
After presenting general notions of mathematical modeling (Section 22.2) and the nature of epidemiological data available to the modeler (Section 22.3), we detail the very basic SIR epidemiological model (Section 22.5).
stochastic
SIR model
deterministic
incubation
infectives
Potential Scenario
186
views
90
downloads
0
comments
2015-Boggess-EtAl-Mathematical Modeling in Ecology - Simulating the Reintroduction of the Extinct Passenger Pigeon
To determine under which conditions a Passenger Pigeon could survive a reintroduction into a natural habitat, we used two types of models.
simulation
agent-based modeling
allee_effect
Passenger Pigeons
forest envirnoment
Holling Type III functional response
Bio-energetics
tree distributions
Technique Narrative
383
views
198
downloads
0
comments
1-030-RandomPerturbation-TechniqueNarrative
After a brief historical view of this problem, we will demonstrate the derivation of first order linear differential equations with random perturbations.
random perturbation
Brownian motion
Langevin equation
Riemann-Steiltjes integral
Wiener process
Ito's calculus
Free Online Textbook
471
views
99
downloads
0
comments
2012-Brian_Ingalls-Mathematical Modelling in Systems Biology An Introduction
This is a comprehensive text with much biology background to motivate the mathematical modeling, exercises and answers, and many rich examples.
spatial
sensitivity analysis
gene regulatory networks
stochastic
bifurcation
metabolic networks
electrophysiology
transduction
rate laws
biochemical reactions
Modeling Scenario
460
views
180
downloads
0
comments
1-039-StochasticPopModels-ModelingScenario
We develop strategies for creating a population model using some simple probabilistic assumptions. These assumptions lead to a system of differential equations for the probability that a system is in state (or population size) n at time t.
Probability
population dynamics
Variance
Mean
stochastic
deterministic
Modeling Scenario
402
views
153
downloads
0
comments
1-001s-StochasticMDeathImmigration-ModelingScenario
We develop a mathematical model of a death and immigration process using m&ms as a stochastic process with the help of probability generating functions (pgf). We start with 50 m&ms in a bag.
simulation
data
logistic
immigration
stochastic
death
fitting
Free Online Textbook
214
views
84
downloads
0
comments
2018-Eduardo-Sontag-Lecture_Notes_on_Mathematical_Systems_Biology
I am often asked if it is OK to use these notes in courses at other universities. The answer is “of course!” though I strongly suggest that a link to my website be provided, so that students can always access the current version.
biology
textbook
systems
dyanmical system
Potential Scenario
225
views
26
downloads
0
comments
2014-John_Cain-Chemical Reaction Kinetics Mathematical Underpinnings
The usual way of deriving kinetic equations involves application of the principle of conservation of mass in conjunction with the law of mass action. Here, examples of kinetic models for several basic processes are discussed.
kinetics
biochemical reaction
reactants
products
Potential Scenario
298
views
51
downloads
0
comments
2008-Claire_Vailance-Reaction_Kinetics-Course_Notes
This is but one of several set of notes which may interest the reader on chemical kinetics.
kinetics
parameters
rate constant
chemical kinetics
reactions
Potential Scenario
260
views
61
downloads
0
comments
1989-EY_Rodin-K_Egan-Mathematics modelling of the rate of chemical reactions
The development of improved designs for chemical reactors as well as the prediction of optimal operating conditions in chemical production are based on an understanding of the rates at which chemical processes occur.
kinetics
first order
reaction
second order
zeroth order
Potential Scenario
192
views
66
downloads
0
comments
2006-Salem-Abudiab-Labview-An Interactive Teaching Tool for a Differential Equations Class
It is evident that computer based learning has become an essential part of education systems. It provides animation and interactive processes that are not possible with textbooks.
java
visualization
virtual lab
pendulum
Labvie
computer assisted instruction
harmonic motion
Potential Scenario
288
views
54
downloads
0
comments
2006-Juska-Gedminiene-Ivanec-Growth of Microbial Populations-Mathematical Modeling-Laboratory Exercises-Model-Based Data Analysis
The aim is to teach the students to use a fresh approach to the problems they are familiar with, to come up with an articulate verbal model after a mental effort, to express it in rigorous mathematical terms, to solve (with the aid of computers).
population growth rate
logistic equation
Verhulst equation
generation time
lag time
Modeling Scenario
323
views
347
downloads
0
comments
5-024-PhGreatLakes
In this teaching modeling scenario, we demonstrate how lessons on salt-tank compartmental modeling can be used to predict phosphorus levels in the Great Lakes.
Great Lakes
limnology
comparment
pollution
compartmental models
phosphorous
Modeling Scenario
404
views
629
downloads
0
comments
1-076-ClimateBifurcation-ModelingScenario
We cover simple zero and one dimensional models for the mean temperature of the Earth. These models can exhibit bifurcations.
energy balance
climate
energy
albedo
Hysteresis
bifurcation
ice-age
greenhouse
balance
Stefan Boltzmann Law
Modeling Scenario
250
views
102
downloads
0
comments
1-067-ModelingWithSigmoidCurves-ModelingScenario
The assignment considers two well-known models of population growth, Verhulst-Pearl and Gompertz models, for which qualitative and quantitative analyses are provided. The graphs of the corresponding functions have a sigmoidal or S-shape.
logistic
Gompertz
sigmoid
Verhulst-Pearl
Potential Scenario
196
views
57
downloads
0
comments
2000-Armson-Cockroft-Stone-Modelling a barnacle goose population
This paper explores a number of models for the growth of a barnacle goose population. These geese spend their summers breeding in Spitsbergen and then winter in Caerlaverock on the Solway Firth. The population growth is modelled using exponential...
population dynamics
exponential
logistic equation
Barnacle Geese
Potential Scenario
142
views
58
downloads
0
comments
2016-Lewnard-Townsend-Climatic and evolutionary drivers of phase shifts in the plague epidemics of colonial India
Our analysis shows that historical datasets can yield powerful insights into the transmission dynamics of reemerging disease agents with which we have limited contemporary experience to guide quantitative modeling and inference.
infectious disease
p
Vector-Borne Disease
lague
plague
Potential Scenario
146
views
93
downloads
0
comments
2014-Hrydziuszko-EtAl-Mathematical Two-compartment Model of Human Cholesterol Transport
We develop a two-compartment mathematical model to investigate cholesterol transport in the circulatory system and its de novo synthesis in the liver.
metabolic syndrome
compartment
cholesterol
two-compartment model
cholesterol transport
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